RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PCDH18Q9HCL0 1135 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 TMEM9BQ9NQ34 198 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 NPDC1Q9NQX5 325 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 ETNK2Q9NVF9 386 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 UVRAGQ9P2Y5 699 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 HECAQ9UBI9 543 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 UBA2Q9UBT2 640 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 SUSD2Q9UGT4 822 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 EVLQ9UI08 416 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 FZD4Q9ULV1 537 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 PYCARDQ9ULZ3 195 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 SLC6A14Q9UN76 642 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 HYOU1Q9Y4L1 999 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 PIEZO1Q92508 2521 aa9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
RTFDC1-205ENST00000466260 A0A1B0GTW7 788 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 ARHGAP42A6NI28 874 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 SOWAHDA6NJG2 315 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 ALOX15BO15296 676 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 BCAT2O15382 392 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 CTIFO43310 598 aaKnown RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 FOXD2O60548 495 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 ZNF821O75541 412 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 PROSCO94903 275 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 IGSF6O95976 241 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 PRNPP04156 253 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 CD48P09326 243 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 FECHP22830 423 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 HTR7P34969 479 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 NOP2P46087 812 aaKnown RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 GEMIN4P57678 1058 aaKnown RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 YBEYP58557 167 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 SNRPD1P62314 119 aaKnown RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 SLC20A2Q08357 652 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 GRIK2Q13002 908 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 SERINC3Q13530 473 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 PUM1Q14671 1186 aaKnown RBP eCLIP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 DPYSL2Q16555 572 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 PARP15Q460N3 678 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 LRRC73Q5JTD7 316 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 AGBL4Q5VU57 503 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 PEAR1Q5VY43 1037 aaPredicted RBP9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 SLC23A3Q6PIS1 610 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 DGLUCYQ7Z3D6 616 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 NIPA2Q8N8Q9 360 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 OR2AP1Q8NGE2 309 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 OR2T34Q8NGX1 318 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 CEP76Q8TAP6 659 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 SLC35G2Q8TBE7 412 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 PPP1R16AQ96I34 528 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 KCNK17Q96T54 332 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 HEPHQ9BQS7 1158 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 CEP44Q9C0F1 390 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 AASDHPPTQ9NRN7 309 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 PPM1HQ9ULR3 514 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 WASF2Q9Y6W5 498 aa9.9□□□□□ -0.82
RTFDC1-205ENST00000466260 CFAP54Q96N23 3096 aa9.9□□□□□ -0.83
RTFDC1-205ENST00000466260 GVINP1Q7Z2Y8 2422 aa9.9□□□□□ -0.83
RTFDC1-205ENST00000466260 A0A1B0GVT2 93 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 ZSCAN5CA6NGD5 496 aaPredicted RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 EIF3CLB5ME19 914 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 ARHGAP33O14559 1287 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 SLC30A4O14863 429 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 INSIG1O15503 277 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 PLRG1O43660 514 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 PCDH8O95206 1070 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 PIGNO95427 931 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 UGT2B4P06133 528 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 IGHV4-34P06331 123 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 SERPINF2P08697 491 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 CYLC1P35663 651 aaPredicted RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 MAGEA1P43355 309 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 CSNK1EP49674 416 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 NDST2P52849 883 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 DPYSQ14117 519 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 BOLA3Q53S33 107 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 PIP5KL1Q5T9C9 394 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 TMCO3Q6UWJ1 677 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 PARS2Q7L3T8 475 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 POLNQ7Z5Q5 900 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 RABEPKQ7Z6M1 372 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 PSTKQ8IV42 348 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 ARHGAP12Q8IWW6 846 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 RHOT2Q8IXI1 618 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 UMODL1-AS1Q8N2C9 162 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 MINDY1Q8N5J2 469 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 KCTD6Q8NC69 237 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 RFFLQ8WZ73 363 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 DNASE2BQ8WZ79 361 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 GDAP1L1Q96MZ0 367 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 KLHL32Q96NJ5 620 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 CSPG4P5Q96PW8 444 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 EIF3CQ99613 913 aaKnown RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 RTKNQ9BST9 563 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 CINPQ9BW66 212 aaPredicted RBP9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 GOLPH3Q9H4A6 298 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 RETREG1Q9H6L5 497 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms