RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	MT-CYB	P00156	380 aa	Predicted RBP	13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	CR2	P20023	1033 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	CD86	P42081	329 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	TNFRSF4	P43489	277 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	LMAN1	P49257	510 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	CARS	P49589	748 aa	Known RBP	13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	ZNF234	Q14588	700 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	KCNJ11	Q14654	390 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	TMEM196	Q5HYL7	178 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	ANKRD22	Q5VYY1	191 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	ALG1L	Q6GMV1	187 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	TPRG1	Q6ZUI0	275 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	PPIL6	Q8IXY8	311 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	PDCD7	Q8N8D1	485 aa	Known RBP	13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	BBOF1	Q8ND07	529 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	ARRDC2	Q8TBH0	407 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	RUBCN	Q92622	972 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	ISG20	Q96AZ6	181 aa	Known RBP	13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	IMP4	Q96G21	291 aa	Known RBP	13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	MSANTD3	Q96H12	275 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	NUDCD1	Q96RS6	583 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	PARD6B	Q9BYG5	372 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	CEP44	Q9C0F1	390 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	ZDHHC4	Q9NPG8	344 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	SCUBE2	Q9NQ36	999 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	ANAPC5	Q9UJX4	755 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	CA14	Q9ULX7	337 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	SLC8A2	Q9UPR5	921 aa		13.58	□□□□□ -0.24
ATF3-208	ENST00000465155	TCRBV7S3A2	A0A539	114 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	IGSF6	O95976	241 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	EGF	P01133	1207 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	MMP2	P08253	660 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	PLTP	P55058	493 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	SEC13	P55735	322 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	SNRPD1	P62314	119 aa	Known RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	CUL1	Q13616	776 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	HLTF	Q14527	1009 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	MORF4L2	Q15014	288 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	EMC10	Q5UCC4	262 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	EGFLAM	Q63HQ2	1017 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	FSTL4	Q6MZW2	842 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155		Q6ZVU0	165 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	PRPF39	Q86UA1	669 aa	Known RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	PCDH20	Q8N6Y1	951 aa	Known RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	ZNF366	Q8N895	744 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	NAT8L	Q8N9F0	302 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	OR2AP1	Q8NGE2	309 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	OR6K2	Q8NGY2	324 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	FAM3C	Q92520	227 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	EZH1	Q92800	747 aa	Predicted RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GDAP1L1	Q96MZ0	367 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	PPP1R2P1	Q96PQ5	205 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	MLPH	Q9BV36	600 aa	Predicted RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	NOD2	Q9HC29	1040 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	AAR2	Q9Y312	384 aa	Known RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	STARD13	Q9Y3M8	1113 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GOLGA6C	A6NDK9	693 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GOLGA6B	A6NDN3	693 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GOLGA8M	H3BSY2	632 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	NDC80	O14777	642 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	TP73	O15350	636 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	INSIG1	O15503	277 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	PMPCB	O75439	489 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	TMEM63A	O94886	807 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	SERPINF2	P08697	491 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GOLGA6D	P0CG33	693 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	DRD1	P21728	446 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	CD72	P21854	359 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	MAGEA6	P43360	314 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GEM	P55040	296 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	VSNL1	P62760	191 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	SKOR1	P84550	965 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	IHH	Q14623	411 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	MLF2	Q15773	248 aa	Predicted RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	PCSK7	Q16549	785 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	WDR93	Q6P2C0	686 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	ZDHHC24	Q6UX98	284 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	SERPINA13P	Q6UXR4	307 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	RYBP	Q8N488	228 aa	Predicted RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	KDM1B	Q8NB78	822 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	FBXO25	Q8TCJ0	367 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	FRS2	Q8WU20	508 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	ART4	Q93070	314 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	MTG2	Q9H4K7	406 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	EIF2B3	Q9NR50	452 aa	Known RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	GOLGA6A	Q9NYA3	693 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	FAM153A	Q9UHL3	310 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	EVL	Q9UI08	416 aa	Predicted RBP	13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	HCN2	Q9UL51	889 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	NFU1	Q9UMS0	254 aa		13.57	□□□□□ -0.24
ATF3-208	ENST00000465155	SHISA7	A6NL88	538 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	ERI2	A8K979	691 aa	Known RBP	13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	WASH3P	C4AMC7	463 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	AP2A1	O95782	977 aa		13.56	□□□□□ -0.24
ATF3-208	ENST00000465155	GSR	P00390	522 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms