RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 C6P13671 934 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 RBMS1P29558 406 aaKnown RBP17.61■□□□□ 0.41
HMGN1-210ENST00000464078 KRT9P35527 623 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 SULT1E1P49888 294 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 CCNHP51946 323 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-210ENST00000464078 PFN3P60673 137 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 APBA1Q02410 837 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
HMGN1-210ENST00000464078 CDKN3Q16667 212 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 EXOC3L4Q17RC7 722 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 KIF26BQ2KJY2 2108 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 SLC25A52Q3SY17 297 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 RBM44Q6ZP01 1051 aaKnown RBP17.61■□□□□ 0.41
HMGN1-210ENST00000464078 EFL1Q7Z2Z2 1120 aaKnown RBP17.61■□□□□ 0.41
HMGN1-210ENST00000464078 PLPP6Q8IY26 295 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 WDR48Q8TAF3 677 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 RAB7BQ96AH8 199 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 ATXN7L3BQ96GX2 97 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 TBATAQ96M53 351 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 BOCQ9BWV1 1114 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 SEMA4CQ9C0C4 833 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 OSBPL2Q9H1P3 480 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 ENTPD2Q9Y5L3 495 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 SNX10Q9Y5X0 201 aa17.61■□□□□ 0.41
HMGN1-210ENST00000464078 K7ENP7 123 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 SPINT1O43278 529 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 JUNDP17535 347 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 CDH5P33151 784 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-210ENST00000464078 ARF5P84085 180 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 DEUP1Q05D60 604 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 PDE1CQ14123 709 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-210ENST00000464078 CARD16Q5EG05 197 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 TPRG1LQ5T0D9 272 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 INO80CQ6PI98 192 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-210ENST00000464078 BNIPLQ7Z465 357 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 CLEC14AQ86T13 490 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 SLC47A2Q86VL8 602 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 BTN2A2Q8WVV5 523 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 ISG20Q96AZ6 181 aaKnown RBP17.6■□□□□ 0.41
HMGN1-210ENST00000464078 MED8Q96G25 268 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 PRR11Q96HE9 360 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-210ENST00000464078 HAPLN3Q96S86 360 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 TBCBQ99426 244 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 ATP13A1Q9HD20 1204 aa17.6■□□□□ 0.41
HMGN1-210ENST00000464078 CPED1A4D0V7 1026 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 B8ZZF3 427 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 BIN1O00499 593 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 ENDOD1O94919 500 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 PON1P27169 355 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 CLCN1P35523 988 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 GABRB2P47870 512 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 GNA12Q03113 381 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 EIF2B5Q13144 721 aaKnown RBP17.59■□□□□ 0.41
HMGN1-210ENST00000464078 SGCGQ13326 291 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 NR0B2Q15466 257 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 NAT6Q93015 286 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 ARHGEF26Q96DR7 871 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 IL12RB2Q99665 862 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 SPON2Q9BUD6 331 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 ZYG11BQ9C0D3 744 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 SIX2Q9NPC8 291 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 TMPRSS4Q9NRS4 437 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 PPARGC1AQ9UBK2 798 aaKnown RBP17.59■□□□□ 0.41
HMGN1-210ENST00000464078 SPASTQ9UBP0 616 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 IPO11Q9UI26 975 aaKnown RBP17.59■□□□□ 0.41
HMGN1-210ENST00000464078 BOD1L1Q8NFC6 3051 aa17.59■□□□□ 0.41
HMGN1-210ENST00000464078 LMO7DNF2Z398 122 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 CD160O95971 181 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 ETFBP38117 255 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 ABL2P42684 1182 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 RPIAP49247 311 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 PDX1P52945 283 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 RNASE9P60153 205 aaKnown RBP17.58■□□□□ 0.4
HMGN1-210ENST00000464078 LY6DQ14210 128 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 DEFB133Q30KQ1 61 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 SLC35F3Q8IY50 421 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 FAM71AQ8IYT1 594 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 ARL14Q8N4G2 192 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 TMEM35BQ8NCS4 154 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 WDR36Q8NI36 951 aaKnown RBP17.58■□□□□ 0.4
HMGN1-210ENST00000464078 LMX1AQ8TE12 382 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 VOPP1Q96AW1 172 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 ZDHHC6Q9H6R6 413 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 PLCB1Q9NQ66 1216 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 APOBEC3BQ9UH17 382 aaKnown RBP17.58■□□□□ 0.4
HMGN1-210ENST00000464078 RWDD2AQ9UIY3 292 aa17.58■□□□□ 0.4
HMGN1-210ENST00000464078 AJAP1Q9UKB5 411 aaPredicted RBP17.58■□□□□ 0.4
HMGN1-210ENST00000464078 IGLON5A6NGN9 336 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 C16orf96A6NNT2 1141 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 AREL1O15033 823 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 ITGA2BP08514 1039 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 FLT3P36888 993 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 GEMIN4P57678 1058 aaKnown RBP17.57■□□□□ 0.4
HMGN1-210ENST00000464078 BPIFB4P59827 614 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 PTK2BQ14289 1009 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 ZNF805Q5CZA5 627 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 PERM1Q5SV97 790 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 C6orf132Q5T0Z8 1188 aa17.57■□□□□ 0.4
HMGN1-210ENST00000464078 FAM102AQ5T9C2 384 aaPredicted RBP17.57■□□□□ 0.4
HMGN1-210ENST00000464078 ARCQ7LC44 396 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms