RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 POPDC2Q9HBU9 364 aa11.42□□□□□ -0.58
SSR3-202ENST00000463503 MRPL47Q9HD33 250 aaKnown RBP11.42□□□□□ -0.58
SSR3-202ENST00000463503 PARVAQ9NVD7 372 aa11.42□□□□□ -0.58
SSR3-202ENST00000463503 UVRAGQ9P2Y5 699 aa11.42□□□□□ -0.58
SSR3-202ENST00000463503 LCMT1Q9UIC8 334 aa11.42□□□□□ -0.58
SSR3-202ENST00000463503 PCDHA13Q9Y5I0 950 aa11.42□□□□□ -0.58
SSR3-202ENST00000463503 LRRK1Q38SD2 2015 aa11.42□□□□□ -0.58
SSR3-202ENST00000463503 FFAR2O15552 330 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 EFSO43281 561 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 LATS1O95835 1130 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 FYNP06241 537 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 GOT1P17174 413 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 RRM1P23921 792 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 NOS2P35228 1153 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 CSKP41240 450 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 VAV2P52735 878 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 OVGP1Q12889 678 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 NNTQ13423 1086 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 MAMLD1Q13495 774 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 EIF4EBP2Q13542 120 aaPredicted RBP11.41□□□□□ -0.58
SSR3-202ENST00000463503 ISXQ2M1V0 245 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 HS1BP3Q53T59 392 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 FAM133BQ5BKY9 247 aaKnown RBP11.41□□□□□ -0.58
SSR3-202ENST00000463503 ADGRF1Q5T601 910 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 BSPRYQ5W0U4 402 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 CCDC81Q6ZN84 652 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 ATG14Q6ZNE5 492 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 SND1Q7KZF4 910 aaKnown RBP eCLIP11.41□□□□□ -0.583e-9■■■■■ 29
SSR3-202ENST00000463503 RSRC2Q7L4I2 434 aaKnown RBP11.41□□□□□ -0.58
SSR3-202ENST00000463503 BNIPLQ7Z465 357 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 CLEC14AQ86T13 490 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 RHOT2Q8IXI1 618 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 OR14C36Q8NHC7 312 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 CLEC4CQ8WTT0 213 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 CTNNBL1Q8WYA6 563 aaPredicted RBP11.41□□□□□ -0.58
SSR3-202ENST00000463503 ZNF653Q96CK0 615 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 PGAP3Q96FM1 320 aaPredicted RBP11.41□□□□□ -0.58
SSR3-202ENST00000463503 APOLD1Q96LR9 279 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 FAM129BQ96TA1 746 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 SELENOOQ9BVL4 669 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 THAP2Q9H0W7 228 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 KCNF1Q9H3M0 494 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 CNOT8Q9UFF9 292 aaKnown RBP11.41□□□□□ -0.58
SSR3-202ENST00000463503 CA5BQ9Y2D0 317 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 REXO2Q9Y3B8 237 aaKnown RBP11.41□□□□□ -0.58
SSR3-202ENST00000463503 PCDHGA8Q9Y5G5 932 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 ADGRG1Q9Y653 693 aa11.41□□□□□ -0.58
SSR3-202ENST00000463503 CLEC18AA5D8T8 446 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 TMCO5BA8MYB1 307 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 TTC34A8MYJ7 566 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 MSI1O43347 362 aaKnown RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 RNASEH1O60930 286 aaKnown RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 PIAS2O75928 621 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 ENDOD1O94919 500 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 ADH1BP00325 375 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 IGLV3-25P01717 112 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 KRT3P12035 628 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 GP1BBP13224 206 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 C5AR1P21730 350 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 TGM2P21980 687 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 MZF1P28698 734 aaPredicted RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 SLC6A4P31645 630 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 CTSOP43234 321 aaPredicted RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 PTPN9P43378 593 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 HARS2P49590 506 aaKnown RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 PDX1P52945 283 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 SFSWAPQ12872 951 aaKnown RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 MPP7Q5T2T1 576 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 FAM102AQ5T9C2 384 aaPredicted RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 PIK3R6Q5UE93 754 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 DNAJC24Q6P3W2 148 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 RFWD3Q6PCD5 774 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 CLEC18BQ6UXF7 455 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 KDM1BQ8NB78 822 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 TMEM145Q8NBT3 493 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 CLEC18CQ8NCF0 446 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 MYEOVQ96EZ4 313 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 ATXN7L3BQ96GX2 97 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 NCAPGQ9BPX3 1015 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 HBS1LQ9Y450 684 aaKnown RBP11.4□□□□□ -0.58
SSR3-202ENST00000463503 ENTPD2Q9Y5L3 495 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 CREBBPQ92793 2442 aa11.4□□□□□ -0.58
SSR3-202ENST00000463503 CELSR2Q9HCU4 2923 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 EDDM13A0A1B0GTR0 161 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 TARSL2A2RTX5 802 aaKnown RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 TMEM191CA6NGB0 347 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 C2CD4BA6NLJ0 364 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 PIK3R2O00459 728 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 PLRG1O43660 514 aaKnown RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 TBL1XO60907 577 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 IGLV3-27P01718 113 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 ASLP04424 464 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 MAT2AP31153 395 aaKnown RBP11.39□□□□□ -0.59
SSR3-202ENST00000463503 C2CD6Q53TS8 623 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 SDK2Q58EX2 2172 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 TRIM69Q86WT6 500 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 MFN1Q8IWA4 741 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 STK40Q8N2I9 435 aa11.39□□□□□ -0.59
SSR3-202ENST00000463503 NIPA2Q8N8Q9 360 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms