RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 EIF3EP60228 445 aaKnown RBP11.96□□□□□ -0.49
CPNE1-221ENST00000462352 MAXP61244 160 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 IFI35P80217 286 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-221ENST00000462352 NSUN2Q08J23 767 aaKnown RBP eCLIP11.96□□□□□ -0.49
CPNE1-221ENST00000462352 TCF15Q12870 199 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 ZBTB17Q13105 803 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 ADAT2Q7Z6V5 191 aaKnown RBP11.96□□□□□ -0.49
CPNE1-221ENST00000462352 RASGEF1CQ8N431 466 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 TMIEQ8NEW7 156 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 PIP4K2CQ8TBX8 421 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 VOPP1Q96AW1 172 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 IL12RB2Q99665 862 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 NAPGQ99747 312 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-221ENST00000462352 MGME1Q9BQP7 344 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 ZDHHC6Q9H6R6 413 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 C10orf88Q9H8K7 445 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 NT5MQ9NPB1 228 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 RBM22Q9NW64 420 aaKnown RBP eCLIP11.96□□□□□ -0.491e-18■■□□□ 14.2
CPNE1-221ENST00000462352 ZSCAN32Q9NX65 697 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 SEPT10Q9P0V9 454 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 AMACRQ9UHK6 382 aa11.96□□□□□ -0.49
CPNE1-221ENST00000462352 SHROOM3Q8TF72 1996 aa11.96□□□□□ -0.5
CPNE1-221ENST00000462352 TTC24A2A3L6 582 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CTAGE9A4FU28 777 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 RNF103O00237 685 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 KPNA3O00505 521 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 INSIG1O15503 277 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 MTSS1O43312 755 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 ZNF217O75362 1048 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 GJB3O75712 270 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 NEBLO76041 1014 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 HLA-DQB2P05538 268 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 TCP1P17987 556 aaKnown RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CR2P20023 1033 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 PTPN3P26045 913 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 RBL1P28749 1068 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 SLC8A1P32418 973 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 SCNN1BP51168 640 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 METAP1P53582 386 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 ETF1P62495 437 aaKnown RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 RAD51Q06609 339 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 WASHC5Q12768 1159 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 SIX1Q15475 284 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 LONRF2Q1L5Z9 754 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 TTC31Q49AM3 519 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 FAM182AQ5T1J6 154 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 FAM46CQ5VWP2 391 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 PAPD7Q5XG87 772 aaKnown RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 SRLQ86TD4 932 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CDKL3Q8IVW4 592 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CNTD1Q8N815 330 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 ZBTB44Q8NCP5 570 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 SLC35B2Q8TB61 432 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 COG1Q8WTW3 980 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 MAIP1Q8WWC4 291 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 C1orf54Q8WWF1 131 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 HTR3CQ8WXA8 447 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 RLN3Q8WXF3 142 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 ATG4AQ8WYN0 398 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 LRIG1Q96JA1 1093 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 MS4A14Q96JA4 679 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 NUDCD1Q96RS6 583 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CEP41Q9BYV8 373 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CPEB1Q9BZB8 566 aaKnown RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 POLR1EQ9GZS1 481 aaKnown RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 KCNH6Q9H252 994 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 PABPC3Q9H361 631 aaKnown RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CD93Q9NPY3 652 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 ITM2CQ9NQX7 267 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 USP36Q9P275 1121 aaKnown RBP11.95□□□□□ -0.5
CPNE1-221ENST00000462352 SCML1Q9UN30 329 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 CYP8B1Q9UNU6 501 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 ATP8A1Q9Y2Q0 1164 aa11.95□□□□□ -0.5
CPNE1-221ENST00000462352 BCLAF3A2AJT9 711 aaKnown RBP11.94□□□□□ -0.5
CPNE1-221ENST00000462352 CES2O00748 559 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 ZNF185O15231 689 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 PIGNO95427 931 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 UGT2B4P06133 528 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 ATXN8OSP0DMR3 200 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 PRLRP16471 622 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 C5AR1P21730 350 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 DRD3P35462 400 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 P2RY2P41231 377 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 MAPK8P45983 427 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 TPMTP51580 245 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 AP1S1P61966 158 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 ITKQ08881 620 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 MAP7D1Q3KQU3 841 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 POM121L1PQ3SYA9 428 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 USP39Q53GS9 565 aaKnown RBP11.94□□□□□ -0.5
CPNE1-221ENST00000462352 TEX44Q53QW1 395 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 RALGPS1Q5JS13 557 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 ALG1LQ6GMV1 187 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 DARS2Q6PI48 645 aaKnown RBP11.94□□□□□ -0.5
CPNE1-221ENST00000462352 NCEH1Q6PIU2 408 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 GDPD4Q6W3E5 623 aa11.94□□□□□ -0.5
CPNE1-221ENST00000462352 USP30Q70CQ3 517 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms