RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 ATP13A4Q4VNC1 1196 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 LRRC38Q5VT99 294 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 AGBL4Q5VU57 503 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 DSG4Q86SJ6 1040 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 NT5DC3Q86UY8 548 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 RHOT1Q8IXI2 618 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 C17orf53Q8N3J3 647 aaPredicted RBP13.07□□□□□ -0.32
SHISA5-211ENST00000460758 ATP11CQ8NB49 1132 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 OR2A12Q8NGT7 310 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 OR2T34Q8NGX1 318 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 OR14C36Q8NHC7 312 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 PIP4K2CQ8TBX8 421 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 SLC6A18Q96N87 628 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 GAREM1Q9H706 876 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 ATP13A1Q9HD20 1204 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHISA5-211ENST00000460758 AMFRQ9UKV5 643 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 FNDC3AQ9Y2H6 1198 aaKnown RBP13.07□□□□□ -0.32
SHISA5-211ENST00000460758 ACTL7AQ9Y615 435 aa13.07□□□□□ -0.32
SHISA5-211ENST00000460758 SPAARA0A1B0GVQ0 90 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 A0A1W2PPC4 97 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 C1QTNF3-AMACRE9PGA6 284 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 ZNF821O75541 412 aaPredicted RBP13.06□□□□□ -0.32
SHISA5-211ENST00000460758 CER1O95813 267 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 RHOQP17081 205 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 L1CAMP32004 1257 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 ACVRL1P37023 503 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 SERPINH1P50454 418 aaKnown RBP13.06□□□□□ -0.32
SHISA5-211ENST00000460758 CLCN6P51797 869 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 CNTN1Q12860 1018 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 SLC14A1Q13336 389 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 DPYSL2Q16555 572 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 KIF19Q2TAC6 998 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 HLA-BQ31612 363 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
SHISA5-211ENST00000460758 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.06□□□□□ -0.32
SHISA5-211ENST00000460758 PEX26Q7Z412 305 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 CHST14Q8NCH0 376 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 TRIM58Q8NG06 486 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 TBC1D31Q96DN5 1066 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 CNTNAP3BQ96NU0 1288 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 CAMK1GQ96NX5 476 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 EPAS1Q99814 870 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 SPON2Q9BUD6 331 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
SHISA5-211ENST00000460758 CNTNAP3Q9BZ76 1288 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 TNKS2Q9H2K2 1166 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 SLC32A1Q9H598 525 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 RETREG1Q9H6L5 497 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 PCDH18Q9HCL0 1135 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 KLHL11Q9NVR0 708 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 TMEM248Q9NWD8 314 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 TPX2Q9ULW0 747 aaKnown RBP13.06□□□□□ -0.32
SHISA5-211ENST00000460758 SNX11Q9Y5W9 270 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 LRRK1Q38SD2 2015 aa13.06□□□□□ -0.32
SHISA5-211ENST00000460758 TRPM6Q9BX84 2022 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 COL5A1P20908 1838 aaPredicted RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 EEF2KO00418 725 aaKnown RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 WNT9AO14904 365 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 SLC7A4O43246 635 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 LATO43561 262 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 PLRG1O43660 514 aaKnown RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 CREB3O43889 395 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 SH3BP5O60239 455 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 CD160O95971 181 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 KRT1P04264 644 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 WNT1P04628 370 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 ZNF883P0CG24 379 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 CHRNA3P32297 505 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 CTNNA1P35221 906 aaKnown RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 MAPKAPK2P49137 400 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 CCR5P51681 352 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 ARSEP51690 589 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 ZNF135P52742 658 aaPredicted RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 CDH6P55285 790 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 TAS2R38P59533 333 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 TPI1P60174 286 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 SHC2P98077 582 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 FOXC1Q12948 553 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 KRT81Q14533 505 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 TEAD4Q15561 434 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 PPP6R3Q5H9R7 873 aaPredicted RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 ZFYVE27Q5T4F4 411 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 PIP5KL1Q5T9C9 394 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 FAM46CQ5VWP2 391 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 RETSATQ6NUM9 610 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 NAXDQ8IW45 347 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 KRT35Q92764 455 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 ARRDC3Q96B67 414 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 TM7SF3Q9NS93 570 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 DDX56Q9NY93 547 aaKnown RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 DNAI1Q9UI46 699 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 ANGPTL2Q9UKU9 493 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 PACSIN2Q9UNF0 486 aaPredicted RBP13.05□□□□□ -0.32
SHISA5-211ENST00000460758 WASF3Q9UPY6 502 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 ANKRD6Q9Y2G4 727 aa13.05□□□□□ -0.32
SHISA5-211ENST00000460758 PCDHA3Q9Y5H8 950 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms