RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ARNT2Q9HBZ2 717 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 MARK1Q9P0L2 795 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 PSMC3IPQ9P2W1 217 aaPredicted RBP24.75■■□□□ 1.55
U2AF1-204ENST00000459639 CLEC4EQ9ULY5 219 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 MYO9BQ13459 2157 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 RANBP2P49792 3224 aaKnown RBP24.75■■□□□ 1.55
U2AF1-204ENST00000459639 CXorf51AA0A1B0GTR3 108 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 ALDH1A2O94788 518 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 TMCC1O94876 653 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 NR1D1P20393 614 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 CRYMQ14894 314 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 PCSK7Q16549 785 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 KBTBD12Q3ZCT8 623 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 SPANXN3Q5MJ09 141 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 CERCAMQ5T4B2 595 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 RETSATQ6NUM9 610 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 APCDD1Q8J025 514 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 LMLNQ96KR4 655 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 TRIM56Q9BRZ2 755 aaKnown RBP24.75■■□□□ 1.55
U2AF1-204ENST00000459639 WNT6Q9Y6F9 365 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 PDE4DIPQ5VU43 2346 aa24.75■■□□□ 1.55
U2AF1-204ENST00000459639 KIF26AQ9ULI4 1882 aaPredicted RBP24.74■■□□□ 1.55
U2AF1-204ENST00000459639 FAM237BA0A1B0GVD1 139 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 LINC01565O15544 149 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 SERPINF2P08697 491 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 CR2P20023 1033 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 CD70P32970 193 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 IHHQ14623 411 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 SKIDA1Q1XH10 827 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 PLEKHG6Q3KR16 790 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 SYCE2Q6PIF2 218 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 ASB16Q96NS5 453 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 BBS2Q9BXC9 721 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 LINC00597Q9H2U6 94 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 PRO3102Q9H379 93 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 MOCS1Q9NZB8 636 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 GDE1Q9NZC3 331 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 SOX13Q9UN79 622 aa24.74■■□□□ 1.55
U2AF1-204ENST00000459639 NEDD8-MDP1E9PL57 170 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 ATP9BO43861 1147 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 USP1O94782 785 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 HOXB8P17481 243 aaPredicted RBP24.73■■□□□ 1.55
U2AF1-204ENST00000459639 MSH2P43246 934 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 FRG1Q14331 258 aaKnown RBP24.73■■□□□ 1.55
U2AF1-204ENST00000459639 ZNF449Q6P9G9 518 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 LINGO4Q6UY18 593 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 TMEM135Q86UB9 458 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 FGF13Q92913 245 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 SMARCD2Q92925 531 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 TTC17Q96AE7 1141 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 FEM1CQ96JP0 617 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 APOL5Q9BWW9 433 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 ZNF576Q9H609 170 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 LMCD1Q9NZU5 365 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 RPS6KL1Q9Y6S9 549 aa24.73■■□□□ 1.55
U2AF1-204ENST00000459639 ANKRD36A6QL64 1941 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 TTC24A2A3L6 582 aaPredicted RBP24.72■■□□□ 1.55
U2AF1-204ENST00000459639 FAM159BA6NKW6 160 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 TPH1P17752 444 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 NR1H3Q13133 447 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 TMED2Q15363 201 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 FAM78AQ5JUQ0 283 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 LY6G5CQ5SRR4 150 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 EMC10Q5UCC4 262 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 TRMT10BQ6PF06 316 aaKnown RBP24.72■■□□□ 1.55
U2AF1-204ENST00000459639 ADGRD1Q6QNK2 874 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 KDM7AQ6ZMT4 941 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 GET4Q7L5D6 327 aaPredicted RBP24.72■■□□□ 1.55
U2AF1-204ENST00000459639 METTL3Q86U44 580 aaKnown RBP24.72■■□□□ 1.55
U2AF1-204ENST00000459639 ADGRG2Q8IZP9 1017 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 PTCD2Q8WV60 388 aaKnown RBP24.72■■□□□ 1.55
U2AF1-204ENST00000459639 SLC44A1Q8WWI5 657 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 NUDCD1Q96RS6 583 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 TBK1Q9UHD2 729 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 LOC285095A0A1B0GVY8 99 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 INSIG1O15503 277 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 EPOP01588 193 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 RGRP47804 291 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 GYS2P54840 703 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 PITRM1Q5JRX3 1037 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 PCID2Q5JVF3 399 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 ARFGAP2Q8N6H7 521 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 DCAKDQ8WVC6 231 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 OSCP1Q8WVF1 389 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 RSPRY1Q96DX4 576 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 KIFC1Q9BW19 673 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 MRM3Q9HC36 420 aaKnown RBP24.72■■□□□ 1.55
U2AF1-204ENST00000459639 ABCB8Q9NUT2 735 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 OBP2AQ9NY56 170 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 LHX3Q9UBR4 397 aa24.72■■□□□ 1.55
U2AF1-204ENST00000459639 GJB3O75712 270 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 TYRP14679 529 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 HLA-FP30511 346 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 HPDP32754 393 aaPredicted RBP24.71■■□□□ 1.55
U2AF1-204ENST00000459639 SERPINH1P50454 418 aaKnown RBP24.71■■□□□ 1.55
U2AF1-204ENST00000459639 NSUN2Q08J23 767 aaKnown RBP eCLIP24.71■■□□□ 1.55
U2AF1-204ENST00000459639 ADAM15Q13444 863 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 SLC1A5Q15758 541 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 RALGPS1Q5JS13 557 aa24.71■■□□□ 1.55
U2AF1-204ENST00000459639 TAOK1Q7L7X3 1001 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms