RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 DCHS1Q96JQ0 3298 aa10.22□□□□□ -0.77
ATG4A-206ENST00000457035 TNRC6BQ9UPQ9 1833 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 IGHV1OR15-9A0A0B4J2B8 117 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 MID1O15344 667 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 CST8O60676 142 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 POP4O95707 220 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 GSRP00390 522 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 IL1BP01584 269 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 C5AR1P21730 350 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 BCKDHBP21953 392 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 CCNCP24863 283 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 PTPN7P35236 360 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 DNA2P51530 1060 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 CCNHP51946 323 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 METAP1P53582 386 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 SNRPD1P62314 119 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 NSUN2Q08J23 767 aaKnown RBP eCLIP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 SLC10A7Q0GE19 358 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 BYSLQ13895 437 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 TFDP2Q14188 446 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 RFTN1Q14699 578 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 MYLK3Q32MK0 819 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 MEI1Q5TIA1 1274 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 DCAF12L1Q5VU92 463 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 KAZNQ674X7 775 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 AADACL2Q6P093 401 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 NPNTQ6UXI9 565 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 TEX26Q8N6G2 289 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 UBL4BQ8N7F7 174 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 SUMF1Q8NBK3 374 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 TSEN2Q8NCE0 465 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 OR2AP1Q8NGE2 309 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 PIP4K2CQ8TBX8 421 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 LRRN4Q8WUT4 740 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 FATE1Q969F0 183 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 RMDN1Q96DB5 314 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 ZC3H10Q96K80 434 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 ZNF599Q96NL3 588 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 HEPHQ9BQS7 1158 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 HEMGNQ9BXL5 484 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 TM6SF2Q9BZW4 377 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 DUSP15Q9H1R2 295 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 EPC1Q9H2F5 836 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 PABPC3Q9H361 631 aaKnown RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 SP110Q9HB58 689 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 WSB2Q9NYS7 404 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 SAE1Q9UBE0 346 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 HECAQ9UBI9 543 aaPredicted RBP10.21□□□□□ -0.77
ATG4A-206ENST00000457035 SCML1Q9UN30 329 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 CYP8B1Q9UNU6 501 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 HEY1Q9Y5J3 304 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 WASF2Q9Y6W5 498 aa10.21□□□□□ -0.77
ATG4A-206ENST00000457035 LRRK1Q38SD2 2015 aa10.21□□□□□ -0.78
ATG4A-206ENST00000457035 MUSKO15146 869 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 MATN3O15232 486 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 ZSCAN12O43309 604 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 LEFTY1O75610 366 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 ADH1BP00325 375 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 DNTTP04053 509 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 PRNPP04156 253 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 ACADMP11310 421 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 MX2P20592 715 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 TGM2P21980 687 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 CD6P30203 668 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 OXTRP30559 389 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 GKP32189 559 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 DRD3P35462 400 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 RECQLP46063 649 aaPredicted RBP10.2□□□□□ -0.78
ATG4A-206ENST00000457035 RGRP47804 291 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 CSNK1DP48730 415 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 NR2C2P49116 596 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 RHOAP61586 193 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 DYNLT1P63172 113 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 PPIDQ08752 370 aaKnown RBP10.2□□□□□ -0.78
ATG4A-206ENST00000457035 HNRNPDQ14103 355 aaKnown RBP10.2□□□□□ -0.78
ATG4A-206ENST00000457035 SIM2Q14190 667 aaPredicted RBP10.2□□□□□ -0.78
ATG4A-206ENST00000457035 PLK5Q496M5 336 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 ATXN7L2Q5T6C5 722 aaPredicted RBP10.2□□□□□ -0.78
ATG4A-206ENST00000457035 TMCO4Q5TGY1 634 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 FAM46CQ5VWP2 391 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 BBS12Q6ZW61 710 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 USP30Q70CQ3 517 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 GVINP1Q7Z2Y8 2422 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 DSG4Q86SJ6 1040 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 KBTBD6Q86V97 674 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 CACUL1Q86Y37 369 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 CCDC50Q8IVM0 306 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 PGBD5Q8N414 524 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 ATPAF2Q8N5M1 289 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 AADATQ8N5Z0 425 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 ANKK1Q8NFD2 765 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 TRIM58Q8NG06 486 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 MAML1Q92585 1016 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 RUBCNQ92622 972 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 FAM131CQ96AQ9 280 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 HDAC11Q96DB2 347 aa10.2□□□□□ -0.78
ATG4A-206ENST00000457035 TOE1Q96GM8 510 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms