RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 NUDCD1Q96RS6 583 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 TM6SF2Q9BZW4 377 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 MKRN2Q9H000 416 aaKnown RBP14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 MTG2Q9H4K7 406 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 IL36AQ9UHA7 158 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 ATP8A1Q9Y2Q0 1164 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 CACNA1HO95180 2353 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 CHD5Q8TDI0 1954 aa14.51□□□□□ -0.09
HMGXB4-204ENST00000455359 GOLGA6L10A0A0M3HER8 536 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 A0A1W2PQ67 120 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 KCNK1O00180 336 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 LIASO43766 372 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 IGLV3-19P01714 112 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 DNTTP04053 509 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 CR2P20023 1033 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 C5AR1P21730 350 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 PTPN3P26045 913 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 RPS14P62263 151 aaKnown RBP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 CSTF1Q05048 431 aaKnown RBP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 SIX1Q15475 284 aaPredicted RBP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 CST6Q15828 149 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 TTC31Q49AM3 519 aaPredicted RBP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 ANO7Q6IWH7 933 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 DARS2Q6PI48 645 aaKnown RBP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 SYT10Q6XYQ8 523 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 SRLQ86TD4 932 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 KBTBD6Q86V97 674 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 LONP2Q86WA8 852 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 MDGA1Q8NFP4 955 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 HMGB4Q8WW32 186 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 SPOCK2Q92563 424 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 PPP1R16AQ96I34 528 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 TEKT5Q96M29 485 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 PPP1R2P1Q96PQ5 205 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 IRF2BPLQ9H1B7 796 aa14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 BCCIPQ9P287 314 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 DRG1Q9Y295 367 aaKnown RBP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 R3HDM2Q9Y2K5 976 aaKnown RBP14.5□□□□□ -0.09
HMGXB4-204ENST00000455359 RNF103O00237 685 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 AXIN1O15169 862 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 SLC7A4O43246 635 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 BNIP3LO60238 219 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ITGAVP06756 1048 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ACADMP11310 421 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 NDUFV2P19404 249 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 OXTRP30559 389 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 CNR2P34972 360 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 PAFAH1B1P43034 410 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 SUOXP51687 545 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 WASHC5Q12768 1159 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ZBTB17Q13105 803 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 TUBB2AQ13885 445 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ANGPT1Q15389 498 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 OASLQ15646 514 aaKnown RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 SLC14A2Q15849 920 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ATXN7L2Q5T6C5 722 aaPredicted RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 C11orf74Q86VG3 221 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 WDR5BQ86VZ2 330 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 CREG2Q8IUH2 290 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 MMAAQ8IVH4 418 aaKnown RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 PGBD3Q8N328 593 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 RYBPQ8N488 228 aaPredicted RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 C12orf50Q8NA57 414 aaPredicted RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 CHST14Q8NCH0 376 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 PIP4K2CQ8TBX8 421 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 RTP4Q96DX8 246 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 C16orf45Q96MC5 204 aaPredicted RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 TUBB2BQ9BVA1 445 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 HDAC8Q9BY41 377 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 PABPC3Q9H361 631 aaKnown RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ATP13A3Q9H7F0 1226 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 USP29Q9HBJ7 922 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 NT5MQ9NPB1 228 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ITM2CQ9NQX7 267 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 POLR3BQ9NW08 1133 aaPredicted RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 ZSCAN32Q9NX65 697 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 DKK3Q9UBP4 350 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 FEZ2Q9UHY8 353 aaPredicted RBP14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 DNPEPQ9ULA0 475 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 WASF2Q9Y6W5 498 aa14.49□□□□□ -0.09
HMGXB4-204ENST00000455359 C5orf60A6NFR6 353 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 KRIT1O00522 736 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 MUSKO15146 869 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 FANCGO15287 622 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 INSIG1O15503 277 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 OPHN1O60890 802 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 SOCS5O75159 536 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 LEFTY1O75610 366 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 IL1BP01584 269 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 HLA-DQB2P05538 268 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 CA4P22748 312 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 ITGB7P26010 798 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 RBL1P28749 1068 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 SERPINA4P29622 427 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 SLC8A1P32418 973 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 SCNN1BP51168 640 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 LMNB2Q03252 620 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 CYP1B1Q16678 543 aa14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 USP39Q53GS9 565 aaKnown RBP14.48□□□□□ -0.09
HMGXB4-204ENST00000455359 ZNF805Q5CZA5 627 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms