RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RNASEH2BQ5TBB1 312 aaKnown RBP14.25□□□□□ -0.13
SHMT2-203ENST00000449049 IZUMO3Q5VZ72 239 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 PCGF5Q86SE9 256 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 PRPF39Q86UA1 669 aaKnown RBP14.25□□□□□ -0.13
SHMT2-203ENST00000449049 PLPP6Q8IY26 295 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 UBALD2Q8IYN6 164 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 TAB3Q8N5C8 712 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-203ENST00000449049 FAM3CQ92520 227 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 CPT1BQ92523 772 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 OXNAD1Q96HP4 312 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-203ENST00000449049 SEMA3CQ99985 751 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 HINFPQ9BQA5 517 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 MLPHQ9BV36 600 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-203ENST00000449049 TMEM245Q9H330 911 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 ARHGEF3Q9NR81 526 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 FAM114A2Q9NRY5 505 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 MYO10Q9HD67 2058 aa14.25□□□□□ -0.13
SHMT2-203ENST00000449049 MAN2B1O00754 1011 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 NDC80O14777 642 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 NPC1O15118 1278 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 GJB3O75712 270 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 IGSF6O95976 241 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 EGFP01133 1207 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 ITIH2P19823 946 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 ENPP2Q13822 863 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 PRPSAP1Q14558 356 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 EGFLAMQ63HQ2 1017 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 HIBCHQ6NVY1 386 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 PPIL6Q8IXY8 311 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 GPR161Q8N6U8 529 aaKnown RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 OR2AP1Q8NGE2 309 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 SPATA22Q8NHS9 363 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 KCNV2Q8TDN2 545 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 GDAP1L1Q96MZ0 367 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 TNKS2Q9H2K2 1166 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 EIF2B3Q9NR50 452 aaKnown RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 SLC8A2Q9UPR5 921 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 AAR2Q9Y312 384 aaKnown RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 ANTXRLA6NF34 631 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 ERI2A8K979 691 aaKnown RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 TTC34A8MYJ7 566 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 F5H423 210 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 INSIG1O15503 277 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 ANXA9O76027 345 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 TPSB2P20231 275 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 SCNN1BP51168 640 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 AP1S1P61966 158 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 SNRPD1P62314 119 aaKnown RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 SKOR1P84550 965 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 IHHQ14623 411 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 NAA30Q147X3 362 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 TPSAB1Q15661 275 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 ACCSLQ4AC99 568 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 FNDC3BQ53EP0 1204 aaKnown RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 ATXN7L2Q5T6C5 722 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 EMC10Q5UCC4 262 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 KCTD11Q693B1 232 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 NCEH1Q6PIU2 408 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 HOOK3Q86VS8 718 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 IFT20Q8IY31 132 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 GJD3Q8N144 294 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 NAT8LQ8N9F0 302 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 RBM15Q96T37 977 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHMT2-203ENST00000449049 TM6SF2Q9BZW4 377 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 NOD2Q9HC29 1040 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 SCUBE2Q9NQ36 999 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 VPS45Q9NRW7 570 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 CA14Q9ULX7 337 aa14.24□□□□□ -0.13
SHMT2-203ENST00000449049 TTC24A2A3L6 582 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 GOLGA6CA6NDK9 693 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 GOLGA6BA6NDN3 693 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 AP2A1O95782 977 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 MT-CYBP00156 380 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 GOLGA6DP0CG33 693 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 TNFRSF8P28908 595 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 CD86P42081 329 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 IL12RB1P42701 662 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 MAPK8P45983 427 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ITGA8P53708 1063 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 GEMP55040 296 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 CBX1P83916 185 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 CALCOCO2Q13137 446 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 MPP3Q13368 585 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 CUL1Q13616 776 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 CCINQ13939 588 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 MORF4L2Q15014 288 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 HNRNPA1L2Q32P51 320 aaKnown RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 CARD16Q5EG05 197 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ANKRD22Q5VYY1 191 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 KDELC1Q6UW63 502 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ZDHHC24Q6UX98 284 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ZNF852Q6ZMS4 543 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 Q6ZVU0 165 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 SRLQ86TD4 932 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 PRCCQ92733 491 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-203ENST00000449049 ART4Q93070 314 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 VOPP1Q96AW1 172 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 NSMCE3Q96MG7 304 aa14.23□□□□□ -0.13
SHMT2-203ENST00000449049 FAM129AQ9BZQ8 928 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms