RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 HSPA13P48723 471 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 SLC7A2P52569 658 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 GEMP55040 296 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 NOMO2Q5JPE7 1267 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 PCID2Q5JVF3 399 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 IL23RQ5VWK5 629 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 ZYG11AQ6WRX3 759 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 ZNF410Q86VK4 478 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 CLVS1Q8IUQ0 354 aaPredicted RBP12.01□□□□□ -0.49
MSH6-204ENST00000445503 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.491e-14■■■■□ 22.5
MSH6-204ENST00000445503 PLAC1Q9HBJ0 212 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 MPP6Q9NZW5 540 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 ERI2A8K979 691 aaKnown RBP12.01□□□□□ -0.49
MSH6-204ENST00000445503 TRIM38O00635 465 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 PSMD3O43242 534 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 F9P00740 461 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 POMCP01189 267 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 LILRA4P59901 499 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 BEX3Q00994 111 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 ADGRE1Q14246 886 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 DHFR2Q86XF0 187 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 OR52K2Q8NGK3 314 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 RMND5BQ96G75 393 aaPredicted RBP12.01□□□□□ -0.49
MSH6-204ENST00000445503 LIN28AQ9H9Z2 209 aaKnown RBP12.01□□□□□ -0.49
MSH6-204ENST00000445503 IGSF9Q9P2J2 1179 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 SLC2A6Q9UGQ3 507 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 SFMBT1Q9UHJ3 866 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 COPG1Q9Y678 874 aaKnown RBP12.01□□□□□ -0.49
MSH6-204ENST00000445503 ANKRD12Q6UB98 2062 aa12.01□□□□□ -0.49
MSH6-204ENST00000445503 DLX3O60479 287 aa12□□□□□ -0.49
MSH6-204ENST00000445503 AHSGP02765 367 aa12□□□□□ -0.49
MSH6-204ENST00000445503 PIRTP0C851 137 aa12□□□□□ -0.49
MSH6-204ENST00000445503 CKMT2P17540 419 aa12□□□□□ -0.49
MSH6-204ENST00000445503 GALK1P51570 392 aa12□□□□□ -0.49
MSH6-204ENST00000445503 GK3PQ14409 553 aa12□□□□□ -0.49
MSH6-204ENST00000445503 OSTM1Q86WC4 334 aa12□□□□□ -0.49
MSH6-204ENST00000445503 PGAM4Q8N0Y7 254 aa12□□□□□ -0.49
MSH6-204ENST00000445503 SEPHS2Q99611 448 aa12□□□□□ -0.49
MSH6-204ENST00000445503 COQ10BQ9H8M1 238 aa12□□□□□ -0.49
MSH6-204ENST00000445503 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
MSH6-204ENST00000445503 ANKRD6Q9Y2G4 727 aa12□□□□□ -0.49
MSH6-204ENST00000445503 AP3B1O00203 1094 aa12□□□□□ -0.49
MSH6-204ENST00000445503 MSI1O43347 362 aaKnown RBP12□□□□□ -0.49
MSH6-204ENST00000445503 TSPAN3O60637 253 aa12□□□□□ -0.49
MSH6-204ENST00000445503 BAIAP3O94812 1187 aa12□□□□□ -0.49
MSH6-204ENST00000445503 CPB1P15086 417 aa12□□□□□ -0.49
MSH6-204ENST00000445503 GLUD2P49448 558 aa12□□□□□ -0.49
MSH6-204ENST00000445503 XIAPP98170 497 aa12□□□□□ -0.49
MSH6-204ENST00000445503 SNAPC2Q13487 334 aa12□□□□□ -0.49
MSH6-204ENST00000445503 CEACAM7Q14002 265 aa12□□□□□ -0.49
MSH6-204ENST00000445503 SCIMPQ6UWF3 145 aa12□□□□□ -0.49
MSH6-204ENST00000445503 ZFRQ96KR1 1074 aaKnown RBP12□□□□□ -0.49
MSH6-204ENST00000445503 ING2Q9H160 280 aa12□□□□□ -0.49
MSH6-204ENST00000445503 GBA3Q9H227 469 aa12□□□□□ -0.49
MSH6-204ENST00000445503 VRTNQ9H8Y1 702 aa12□□□□□ -0.49
MSH6-204ENST00000445503 SUN2Q9UH99 717 aa12□□□□□ -0.49
MSH6-204ENST00000445503 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
MSH6-204ENST00000445503 SUPT3HB4E1H0 165 aa12□□□□□ -0.49
MSH6-204ENST00000445503 GNGT2O14610 69 aa12□□□□□ -0.49
MSH6-204ENST00000445503 INPP4BO15327 924 aa12□□□□□ -0.49
MSH6-204ENST00000445503 ATP5F1P24539 256 aaPredicted RBP12□□□□□ -0.49
MSH6-204ENST00000445503 CCR1P32246 355 aa12□□□□□ -0.49
MSH6-204ENST00000445503 MSLNQ13421 630 aaPredicted RBP12□□□□□ -0.49
MSH6-204ENST00000445503 FAM91A1Q658Y4 838 aa12□□□□□ -0.49
MSH6-204ENST00000445503 MIB1Q86YT6 1006 aa12□□□□□ -0.49
MSH6-204ENST00000445503 HERC6Q8IVU3 1022 aa12□□□□□ -0.49
MSH6-204ENST00000445503 HEXDCQ8WVB3 486 aa12□□□□□ -0.49
MSH6-204ENST00000445503 BTBD9Q96Q07 612 aa12□□□□□ -0.49
MSH6-204ENST00000445503 DRC3Q9H069 523 aa12□□□□□ -0.49
MSH6-204ENST00000445503 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
MSH6-204ENST00000445503 EIF2B3Q9NR50 452 aaKnown RBP12□□□□□ -0.49
MSH6-204ENST00000445503 MATN2O00339 956 aa12□□□□□ -0.49
MSH6-204ENST00000445503 CXCL11O14625 94 aa12□□□□□ -0.49
MSH6-204ENST00000445503 FBXO21O94952 628 aa12□□□□□ -0.49
MSH6-204ENST00000445503 MT-ND1P03886 318 aa12□□□□□ -0.49
MSH6-204ENST00000445503 ARRB2P32121 409 aa12□□□□□ -0.49
MSH6-204ENST00000445503 CDH15P55291 814 aa12□□□□□ -0.49
MSH6-204ENST00000445503 MS4A2Q01362 244 aa12□□□□□ -0.49
MSH6-204ENST00000445503 INPP5AQ14642 412 aa12□□□□□ -0.49
MSH6-204ENST00000445503 MFSD4BQ5TF39 518 aa12□□□□□ -0.49
MSH6-204ENST00000445503 OR9I1Q8NGQ6 314 aa12□□□□□ -0.49
MSH6-204ENST00000445503 EMID1Q96A84 441 aaPredicted RBP12□□□□□ -0.49
MSH6-204ENST00000445503 VPS50Q96JG6 964 aa12□□□□□ -0.49
MSH6-204ENST00000445503 KLHL5Q96PQ7 755 aa12□□□□□ -0.49
MSH6-204ENST00000445503 TRIM15Q9C019 465 aa12□□□□□ -0.49
MSH6-204ENST00000445503 MID1IP1Q9NPA3 183 aa12□□□□□ -0.49
MSH6-204ENST00000445503 GALNT8Q9NY28 637 aa12□□□□□ -0.49
MSH6-204ENST00000445503 RCOR3Q9P2K3 495 aaPredicted RBP12□□□□□ -0.49
MSH6-204ENST00000445503 MYRFQ9Y2G1 1151 aa12□□□□□ -0.49
MSH6-204ENST00000445503 SIPA1L1O43166 1804 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 H3BSA7 217 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 GABBR2O75899 941 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 TMCC1O94876 653 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 PYGLP06737 847 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 SNRPB2P08579 225 aaKnown RBP11.99□□□□□ -0.49
MSH6-204ENST00000445503 SMIM10L2AP0DMW4 78 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 SMIM10L2BP0DMW5 78 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 PCSK1P29120 753 aa11.99□□□□□ -0.49
MSH6-204ENST00000445503 HADHAP40939 763 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms