RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TMCO4Q5TGY1 634 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 SERPINA13PQ6UXR4 307 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 CHPFQ8IZ52 775 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 SH2D3CQ8N5H7 860 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 ALLCQ8N6M5 410 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 MAGOHBQ96A72 148 aaKnown RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 MRGPRX3Q96LB0 322 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 CCDC114Q96M63 670 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 TSGA13Q96PP4 275 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 TMEM121Q9BTD3 319 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 CINPQ9BW66 212 aaPredicted RBP17.5■□□□□ 0.39
LIME1-202ENST00000444951 BRD8Q9H0E9 1235 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 TNKS2Q9H2K2 1166 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 TTLL3Q9Y4R7 772 aa17.5■□□□□ 0.39
LIME1-202ENST00000444951 CACNA1BQ00975 2339 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 CD160O95971 181 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 SRPRAP08240 638 aaKnown RBP17.49■□□□□ 0.39
LIME1-202ENST00000444951 CCNB1P14635 433 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 IL12RB1P42701 662 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 KIR2DL1P43626 348 aaPredicted RBP17.49■□□□□ 0.39
LIME1-202ENST00000444951 ITKQ08881 620 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 ZNF235Q14590 738 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 LBRQ14739 615 aaKnown RBP17.49■□□□□ 0.39
LIME1-202ENST00000444951 CYTH1Q15438 398 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 DLG2Q15700 870 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 FBXO43Q4G163 708 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 PPM1JQ5JR12 505 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 MARC1Q5VT66 337 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 SYT13Q7L8C5 426 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 KLHL7Q8IXQ5 586 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 CAMKK1Q8N5S9 505 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 SLC35B2Q8TB61 432 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 HTR3CQ8WXA8 447 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 EXOC2Q96KP1 924 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 FRMD8P1Q9BZ68 369 aaPredicted RBP17.49■□□□□ 0.39
LIME1-202ENST00000444951 TM6SF2Q9BZW4 377 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 NT5MQ9NPB1 228 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 RBM22Q9NW64 420 aaKnown RBP eCLIP17.49■□□□□ 0.39
LIME1-202ENST00000444951 THAP10Q9P2Z0 257 aaPredicted RBP17.49■□□□□ 0.39
LIME1-202ENST00000444951 RNF14Q9UBS8 474 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 STARD13Q9Y3M8 1113 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 STON1Q9Y6Q2 735 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 CHD5Q8TDI0 1954 aa17.49■□□□□ 0.39
LIME1-202ENST00000444951 CHD8Q9HCK8 2581 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 SGK1O00141 431 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 RNF103O00237 685 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 PEX11BO96011 259 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 EPHX1P07099 455 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 CHRM1P11229 460 aaPredicted RBP17.48■□□□□ 0.39
LIME1-202ENST00000444951 PRKCHP24723 683 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 MMP13P45452 471 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 RHOAP61586 193 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 SLC20A2Q08357 652 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 ZBTB17Q13105 803 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 PLK5Q496M5 336 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 TCEAL6Q6IPX3 200 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 SDE2Q6IQ49 451 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 C22orf39Q6P5X5 142 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 Q6ZVU0 165 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 GSTA5Q7RTV2 222 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 RYBPQ8N488 228 aaPredicted RBP17.48■□□□□ 0.39
LIME1-202ENST00000444951 FAM71DQ8N9W8 422 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 TXNDC5Q8NBS9 432 aaKnown RBP17.48■□□□□ 0.39
LIME1-202ENST00000444951 TCEAL3Q969E4 200 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 MYO19Q96H55 970 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 LOXL4Q96JB6 756 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 ZNF599Q96NL3 588 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 AGAP3Q96P47 875 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 FERMT1Q9BQL6 677 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 DUSP15Q9H1R2 295 aaPredicted RBP17.48■□□□□ 0.39
LIME1-202ENST00000444951 HOMER3Q9NSC5 361 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 HS3ST2Q9Y278 367 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 INVSQ9Y283 1065 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 MRFAP1Q9Y605 127 aa17.48■□□□□ 0.39
LIME1-202ENST00000444951 TTC24A2A3L6 582 aaPredicted RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 BCLAF3A2AJT9 711 aaKnown RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 F5H423 210 aaPredicted RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 PHF2O75151 1096 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 APBB3O95704 486 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 IFNB1P01574 187 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 ADRB1P08588 477 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 HNRNPLP14866 589 aaKnown RBP eCLIP17.47■□□□□ 0.39
LIME1-202ENST00000444951 NTSR1P30989 418 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 RENBPP51606 427 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 MAXP61244 160 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 MRPS21P82921 87 aaKnown RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 CKAP4Q07065 602 aaKnown RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 C2orf54Q08AI8 447 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 WHAMMP3Q1A5X7 153 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 AASDHQ4L235 1098 aaPredicted RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 PLA2G2CQ5R387 149 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 ATXN7L2Q5T6C5 722 aaPredicted RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 TTC27Q6P3X3 843 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 BBS5Q8N3I7 341 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 IL17RCQ8NAC3 791 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 TSEN2Q8NCE0 465 aaKnown RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 ZC3H10Q96K80 434 aaKnown RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 DDX47Q9H0S4 455 aaKnown RBP17.47■□□□□ 0.39
LIME1-202ENST00000444951 SEPT3Q9UH03 358 aa17.47■□□□□ 0.39
LIME1-202ENST00000444951 MAP1BP46821 2468 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms