RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 SPEM1Q8N4L4 309 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 CEP112Q8N8E3 955 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 CCDC89Q8N998 374 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 OR2A12Q8NGT7 310 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 OR8D1Q8WZ84 308 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 PBXIP1Q96AQ6 731 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 SPATA13Q96N96 652 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 NUDCD1Q96RS6 583 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 MGME1Q9BQP7 344 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 FBRSQ9HAH7 460 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 GLOD4Q9HC38 313 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 TTLL3Q9Y4R7 772 aa16.01■□□□□ 0.15
USP40-206ENST00000443711 TRIOO75962 3097 aa16■□□□□ 0.15
USP40-206ENST00000443711 CTAGE15A4D2H0 777 aa16■□□□□ 0.15
USP40-206ENST00000443711 DLL1O00548 723 aa16■□□□□ 0.15
USP40-206ENST00000443711 ALOX15BO15296 676 aa16■□□□□ 0.15
USP40-206ENST00000443711 GAS8O95995 478 aa16■□□□□ 0.15
USP40-206ENST00000443711 IFNB1P01574 187 aa16■□□□□ 0.15
USP40-206ENST00000443711 CTAGE8P0CG41 777 aa16■□□□□ 0.15
USP40-206ENST00000443711 MAPK8P45983 427 aa16■□□□□ 0.15
USP40-206ENST00000443711 RGRP47804 291 aa16■□□□□ 0.15
USP40-206ENST00000443711 SCNN1BP51168 640 aa16■□□□□ 0.15
USP40-206ENST00000443711 MAXP61244 160 aa16■□□□□ 0.15
USP40-206ENST00000443711 AP1S1P61966 158 aa16■□□□□ 0.15
USP40-206ENST00000443711 GAS6Q14393 721 aa16■□□□□ 0.15
USP40-206ENST00000443711 P3H1Q32P28 736 aa16■□□□□ 0.15
USP40-206ENST00000443711 ALG1LQ6GMV1 187 aa16■□□□□ 0.15
USP40-206ENST00000443711 C4orf22Q6V702 233 aa16■□□□□ 0.15
USP40-206ENST00000443711 DPY19L3Q6ZPD9 716 aa16■□□□□ 0.15
USP40-206ENST00000443711 ARHGEF18Q6ZSZ5 1173 aa16■□□□□ 0.15
USP40-206ENST00000443711 BMP8AQ7Z5Y6 402 aa16■□□□□ 0.15
USP40-206ENST00000443711 DSG4Q86SJ6 1040 aa16■□□□□ 0.15
USP40-206ENST00000443711 CTAGE6Q86UF2 777 aa16■□□□□ 0.15
USP40-206ENST00000443711 CTAGE4Q8IX94 777 aa16■□□□□ 0.15
USP40-206ENST00000443711 STK40Q8N2I9 435 aa16■□□□□ 0.15
USP40-206ENST00000443711 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
USP40-206ENST00000443711 ZNF419Q96HQ0 510 aaPredicted RBP16■□□□□ 0.15
USP40-206ENST00000443711 EXOC2Q96KP1 924 aa16■□□□□ 0.15
USP40-206ENST00000443711 SEMA3CQ99985 751 aa16■□□□□ 0.15
USP40-206ENST00000443711 HEPHQ9BQS7 1158 aa16■□□□□ 0.15
USP40-206ENST00000443711 COL25A1Q9BXS0 654 aaPredicted RBP16■□□□□ 0.15
USP40-206ENST00000443711 SLC25A51Q9H1U9 297 aa16■□□□□ 0.15
USP40-206ENST00000443711 EPHX3Q9H6B9 360 aa16■□□□□ 0.15
USP40-206ENST00000443711 SCUBE2Q9NQ36 999 aa16■□□□□ 0.15
USP40-206ENST00000443711 EVLQ9UI08 416 aaPredicted RBP16■□□□□ 0.15
USP40-206ENST00000443711 A0A1W2PQF6 199 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 PI15O43692 258 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 RNASEH1O60930 286 aaKnown RBP15.99■□□□□ 0.15
USP40-206ENST00000443711 ECEL1O95672 775 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 CR2P20023 1033 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 CCNHP51946 323 aaPredicted RBP15.99■□□□□ 0.15
USP40-206ENST00000443711 DGKEP52429 567 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 NRLP54845 237 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 C2orf54Q08AI8 447 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 ELAVL3Q14576 367 aaKnown RBP15.99■□□□□ 0.15
USP40-206ENST00000443711 GRM3Q14832 879 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 CRY1Q16526 586 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 KIAA1211LQ6NV74 962 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 OR2T3Q8NH03 318 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 SLCO2A1Q92959 643 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 FAM129BQ96TA1 746 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 KRT12Q99456 494 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 CPEB1Q9BZB8 566 aaKnown RBP15.99■□□□□ 0.15
USP40-206ENST00000443711 L2HGDHQ9H9P8 463 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 POLMQ9NP87 494 aaPredicted RBP15.99■□□□□ 0.15
USP40-206ENST00000443711 DLGAP2Q9P1A6 1054 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 PAK5Q9P286 719 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 RSPH14Q9UHP6 348 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 ANKRD36A6QL64 1941 aa15.99■□□□□ 0.15
USP40-206ENST00000443711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.98■□□□□ 0.15
USP40-206ENST00000443711 INSIG1O15503 277 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 KRT14P02533 472 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 PRNPP04156 253 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 SERPINF2P08697 491 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 NFKB1P19838 968 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 COL9A1P20849 921 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 CD68P34810 354 aaPredicted RBP15.98■□□□□ 0.15
USP40-206ENST00000443711 DR1Q01658 176 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 DSC2Q02487 901 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 NIPAL4Q0D2K0 466 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 DHX34Q14147 1143 aaKnown RBP15.98■□□□□ 0.15
USP40-206ENST00000443711 PRPSAP1Q14558 356 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 PARP6Q2NL67 630 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 NCEH1Q6PIU2 408 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 TMEM92Q6UXU6 159 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 MAMSTRQ6ZN01 415 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 SYDE1Q6ZW31 735 aaPredicted RBP15.98■□□□□ 0.15
USP40-206ENST00000443711 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.98■□□□□ 0.15
USP40-206ENST00000443711 CHST14Q8NCH0 376 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 TMIEQ8NEW7 156 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 OR6K2Q8NGY2 324 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 ARRDC2Q8TBH0 407 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 IMP4Q96G21 291 aaKnown RBP15.98■□□□□ 0.15
USP40-206ENST00000443711 LRIG1Q96JA1 1093 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 PPP1R2P1Q96PQ5 205 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 FCRL5Q96RD9 977 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 TUBGCP5Q96RT8 1024 aa15.98■□□□□ 0.15
USP40-206ENST00000443711 RSPH9Q9H1X1 276 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms