RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MFSD11O43934 449 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 MX2P20592 715 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 ITPKAP23677 461 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 HSPA9P38646 679 aaKnown RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 GARSP41250 739 aaKnown RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 ADPRHP54922 357 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 CNTN1Q12860 1018 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 TAZQ16635 292 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 AGBL4Q5VU57 503 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 DCAF12L1Q5VU92 463 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 TIGD7Q6NT04 549 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 ARHGAP36Q6ZRI8 547 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 ARMCX6Q7L4S7 300 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 TP53INP2Q8IXH6 220 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 RCOR2Q8IZ40 523 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 SYCE1Q8N0S2 351 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 BBS5Q8N3I7 341 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 RYBPQ8N488 228 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 RNF10Q8N5U6 811 aaKnown RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 LRRC57Q8N9N7 239 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 OR14C36Q8NHC7 312 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 GRIN3AQ8TCU5 1115 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 HCAR2Q8TDS4 363 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 NSMCE1Q8WV22 266 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 PIGKQ92643 395 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 TSGA13Q96PP4 275 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 PSKH2Q96QS6 385 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 CINPQ9BW66 212 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 C6orf106Q9H6K1 298 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 ZDHHC6Q9H6R6 413 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 PARD6AQ9NPB6 346 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 SEPT3Q9UH03 358 aa15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.26■□□□□ 0.03
CSNK1E-210ENST00000442216 PLXNA2O75051 1894 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 CCDC66A2RUB6 948 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 KRIT1O00522 736 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 KRT86O43790 486 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 ZRANB2O95218 330 aaKnown RBP eCLIP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 PEX11BO96011 259 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 TNNT1P13805 278 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 GNSP15586 552 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 CCNCP24863 283 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 CTNNA1P35221 906 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 NUDT1P36639 197 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 CCR5P51681 352 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 NEK3P51956 506 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 METAP1P53582 386 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 HNRNPDQ14103 355 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 TFDP2Q14188 446 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 LBRQ14739 615 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 DUOXA1Q1HG43 343 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 ZNF805Q5CZA5 627 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 ATXN7L2Q5T6C5 722 aaPredicted RBP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 PIP5KL1Q5T9C9 394 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 KIAA0895LQ68EN5 471 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 NEK5Q6P3R8 708 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 SLC23A3Q6PIS1 610 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 PRR23CQ6ZRP0 262 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 ZNF662Q6ZS27 426 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 ERN2Q76MJ5 926 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 RGL4Q8IZJ4 473 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 DEFB119Q8N690 84 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 PLD5Q8N7P1 536 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 NETO2Q8NC67 525 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 EXD1Q8NHP7 514 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 VOPP1Q96AW1 172 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 ARRDC3Q96B67 414 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 HDAC11Q96DB2 347 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 TUBGCP5Q96RT8 1024 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 GOLPH3Q9H4A6 298 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 PREBQ9HCU5 417 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 TMEM74BQ9NUR3 256 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 PCDHA3Q9Y5H8 950 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 CACNA1EQ15878 2313 aa15.25■□□□□ 0.03
CSNK1E-210ENST00000442216 TP53BP1Q12888 1972 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 ADAMTS9Q9P2N4 1935 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 GRID2IPA4D2P6 1211 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 APOL1O14791 398 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 CTNNA2P26232 953 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 CDKN2BP42772 138 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 MAPK8P45983 427 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 COPS2P61201 443 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 CCZ1BP86790 482 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 CCZ1P86791 482 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 SLC10A7Q0GE19 358 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 PPP2R5EQ16537 467 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 TFDP3Q5H9I0 405 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 RALGPS1Q5JS13 557 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 NCEH1Q6PIU2 408 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 MFSD7Q6UXD7 560 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 GDPD4Q6W3E5 623 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 SRLQ86TD4 932 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 ZSCAN30Q86W11 494 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 TRIM69Q86WT6 500 aa15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 TSEN2Q8NCE0 465 aaKnown RBP15.24■□□□□ 0.03
CSNK1E-210ENST00000442216 ANP32BQ92688 251 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms