RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SLC6A4P31645 630 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ACVRL1P37023 503 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 LIMK2P53671 638 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 RPS24P62847 133 aaKnown RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 PRAMEP78395 509 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 CRADDP78560 199 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 DSC2Q02487 901 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 SLC20A2Q08357 652 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 SLC10A7Q0GE19 358 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 POU6F1Q14863 301 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 MPP7Q5T2T1 576 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 RNF187Q5TA31 235 aaPredicted RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 MROH9Q5TGP6 573 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 TRMT10BQ6PF06 316 aaKnown RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 MFN1Q8IWA4 741 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 TCP10LQ8TDR4 215 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 DDI1Q8WTU0 396 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 POF1BQ8WVV4 589 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 PTPRN2Q92932 1015 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 VPS39Q96JC1 886 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 SEC16BQ96JE7 1060 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ADGRE3Q9BY15 652 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 PIDD1Q9HB75 910 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 IL21Q9HBE4 155 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 IARS2Q9NSE4 1012 aaKnown RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 PCMTD2Q9NV79 361 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 NDFIP2Q9NV92 336 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 KIAA1522Q9P206 1035 aaPredicted RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 PRKAG3Q9UGI9 489 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 RIMKLBQ9ULI2 386 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ATXN2Q99700 1313 aaKnown RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 C2orf78A6NCI8 922 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 GOLGA8RI6L899 631 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ASMTLO95671 621 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ITGA2BP08514 1039 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 POU2F2P09086 479 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 NFKBIAP25963 317 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ADRA1AP35348 466 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 RHOAP61586 193 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 AP1S1P61966 158 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 CYP4F8P98187 520 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 BMPR2Q13873 1038 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 SETDB1Q15047 1291 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 GPR158Q5T848 1215 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 TXNDC8Q6A555 127 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 RANBP10Q6VN20 620 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 HTR3DQ70Z44 454 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 SPATA21Q7Z572 469 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 SDCCAG8Q86SQ7 713 aaPredicted RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 DCAF4L2Q8NA75 395 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 DENND1AQ8TEH3 1009 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 SCG3Q8WXD2 468 aaKnown RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 DPF3Q92784 378 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS50-205ENST00000441602 MRGPRX2Q96LB1 330 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 PSKH2Q96QS6 385 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 KLF6Q99612 283 aaPredicted RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 RBBP8Q99708 897 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ELAC2Q9BQ52 826 aaKnown RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 LMAN2LQ9H0V9 348 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 RHOJQ9H4E5 214 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 FAM96AQ9H5X1 160 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 MLXIPLQ9NP71 852 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ARHGAP26Q9UNA1 814 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 VPS9D1Q9Y2B5 631 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 ARL2BPQ9Y2Y0 163 aa6.1□□□□□ -1.43
VPS50-205ENST00000441602 USP15Q9Y4E8 981 aaPredicted RBP6.1□□□□□ -1.43
VPS50-205ENST00000441602 CXorf49A8MYA2 514 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 BIRC5O15392 142 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 CCL16O15467 120 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 MT-CYBP00156 380 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 SPATA31D3P0C874 917 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 ERVK-10P10266 1014 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 CRHR1P34998 444 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 RPA3P35244 121 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 CD151P48509 253 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 NEK3P51956 506 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 HNRNPH2P55795 449 aaKnown RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 RAD51Q06609 339 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 NSUN2Q08J23 767 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS50-205ENST00000441602 ZKSCAN8Q15776 578 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 CCDC153Q494R4 210 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 INO80DQ53TQ3 878 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 HSP90AA5PQ58FG0 334 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 TSTD2Q5T7W7 516 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 SPATA31D4Q6ZUB0 917 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 C16orf59Q7L2K0 433 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 GBP7Q8N8V2 638 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 MAB21L3Q8N8X9 362 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 TTC16Q8NEE8 873 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 ACDQ96AP0 544 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 OTUB2Q96DC9 234 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 ZNF317Q96PQ6 595 aaPredicted RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 NUDCD1Q96RS6 583 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 MGME1Q9BQP7 344 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 KIF9Q9HAQ2 790 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 PIH1D1Q9NWS0 290 aaKnown RBP6.09□□□□□ -1.43
VPS50-205ENST00000441602 ZDHHC7Q9NXF8 308 aa6.09□□□□□ -1.43
VPS50-205ENST00000441602 COL4A6Q14031 1691 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms