RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 VWA5B1Q5TIE3 1220 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 IQCF2Q8IXL9 164 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 RHOXF1Q8NHV9 184 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 FAM84AQ96KN4 292 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 MCEEQ96PE7 176 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 TBCBQ99426 244 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 MTG1Q9BT17 334 aaPredicted RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 SPAG4Q9NPE6 437 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 IFT80Q9P2H3 777 aaPredicted RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 COPG1Q9Y678 874 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 PFDN6O15212 129 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 TPD52L2O43399 206 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 NUAK1O60285 661 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 C19orf57Q0VDD7 668 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 BST2Q10589 180 aaKnown RBP5.21□□□□□ -1.58
RIF1-203ENST00000428287 GRM1Q13255 1194 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 FAM47CQ5HY64 1035 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 LIPMQ5VYY2 423 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 BTBD8Q5XKL5 378 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 ANKRD52Q8NB46 1076 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PCDH19Q8TAB3 1148 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 FAR2Q96K12 515 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PHF12Q96QT6 1004 aa5.21□□□□□ -1.58
RIF1-203ENST00000428287 PCDH15Q96QU1 1955 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 NUP210LQ5VU65 1888 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 WDR64B1ANS9 1081 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 FOXD2O60548 495 aaPredicted RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 PRKCAP17252 672 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 GSTM2P28161 218 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 LIMK2P53671 638 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 YWHAGP61981 247 aaKnown RBP eCLIP5.2□□□□□ -1.58
RIF1-203ENST00000428287 PMF1Q6P1K2 205 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 GALNT4Q8N4A0 578 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 RDH11Q8TC12 318 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 GPR22Q99680 433 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ARPC5LQ9BPX5 153 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 MXRA8Q9BRK3 442 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 PCIF1Q9H4Z3 704 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 PMF1-BGLAPU3KQ54 211 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 VNN1O95497 513 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 CD68P34810 354 aaPredicted RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 DLG2Q15700 870 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 MTX3Q5HYI7 312 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 TMEM270Q6UE05 265 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 DPP8Q6V1X1 898 aaPredicted RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 PLEKHG7Q6ZR37 379 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 CBR4Q8N4T8 237 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 GPR78Q96P69 363 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ALPK1Q96QP1 1244 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 MUC13Q9H3R2 512 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 IFT122Q9HBG6 1241 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ENPP5Q9UJA9 477 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 MID2Q9UJV3 735 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 MTMR7Q9Y216 660 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 DDHD2O94830 711 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 METTL18O95568 372 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 HMGCRP04035 888 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 KRT3P12035 628 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 EEF2P13639 858 aaKnown RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 EIF2AK2P19525 551 aaKnown RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 MX2P20592 715 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 PCYT1AP49585 367 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 TKTL1P51854 596 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 FAM209AQ5JX71 171 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 FAM45BPQ6NSW5 357 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 FAM45AQ8TCE6 357 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ATP6V0A1Q93050 837 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 TCF12Q99081 682 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 CDCA7Q9BWT1 371 aaPredicted RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 SHCBP1LQ9BZQ2 653 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ZFYVE28Q9HCC9 887 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 OAZ3Q9UMX2 235 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 REV3LO60673 3130 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 YLPM1P49750 1951 aaKnown RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 WDR90Q96KV7 1748 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ILVBLA1L0T0 632 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 SAGE2PA6NJ88 616 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 RASAL1O95294 804 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 KRT1P04264 644 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ARP10275 920 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 EIF2DP41214 584 aaKnown RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 TTC33Q6PID6 262 aaPredicted RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 BPHLQ86WA6 291 aaPredicted RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 CENPLQ8N0S6 344 aaPredicted RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 OR2T34Q8NGX1 318 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 OR2T3Q8NH03 318 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 CERKQ8TCT0 537 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 TRMOQ9BU70 441 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 CISHQ9NSE2 258 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.2□□□□□ -1.582e-7■■■■■ 31.2
RIF1-203ENST00000428287 EML6Q6ZMW3 1958 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 UNCXA6NJT0 531 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 H0YCG3 227 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 EXTL3O43909 919 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 KITP10721 976 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ITIH1P19827 911 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 ETV6P41212 452 aa5.2□□□□□ -1.58
RIF1-203ENST00000428287 MRPL19P49406 292 aaKnown RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 HADHQ16836 314 aaKnown RBP5.2□□□□□ -1.58
RIF1-203ENST00000428287 CDONQ4KMG0 1287 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms