RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-205	ENST00000427561	TMEM59L	Q9UK28	342 aa		13.93	□□□□□ -0.18
UBA1-205	ENST00000427561	FCF1	Q9Y324	198 aa	Known RBP	13.93	□□□□□ -0.18
UBA1-205	ENST00000427561		U3KQA8	63 aa		13.93	□□□□□ -0.18
UBA1-205	ENST00000427561	CPED1	A4D0V7	1026 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	CAPN8	A6NHC0	703 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	C16orf96	A6NNT2	1141 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	NEMP1	O14524	444 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	RAD51B	O15315	384 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	AQP9	O43315	295 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	LSM8	O95777	96 aa	Known RBP	13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	PRKCSH	P14314	528 aa	Predicted RBP	13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	JUND	P17535	347 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	GEMIN4	P57678	1058 aa	Known RBP	13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	TMPRSS3	P57727	454 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	PDE1C	Q14123	709 aa	Predicted RBP	13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	ISX	Q2M1V0	245 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	C2CD6	Q53TS8	623 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	TAF3	Q5VWG9	929 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	TRNP1	Q6NT89	227 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	DPY19L2P1	Q6NXN4	242 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	ARC	Q7LC44	396 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	BNIPL	Q7Z465	357 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	ZNF605	Q86T29	641 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	RYBP	Q8N488	228 aa	Predicted RBP	13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	TPCN2	Q8NHX9	752 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	BTN2A2	Q8WVV5	523 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	KCNE4	Q8WWG9	221 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	ASB12	Q8WXK4	309 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	GRAMD1A	Q96CP6	724 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	ARHGEF26	Q96DR7	871 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	KLF6	Q99612	283 aa	Predicted RBP	13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	IL12RB2	Q99665	862 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	TM6SF2	Q9BZW4	377 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	RETREG1	Q9H6L5	497 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	LOC400499	M0QZD8	3231 aa		13.92	□□□□□ -0.18
UBA1-205	ENST00000427561	IGLON5	A6NGN9	336 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	ERVH48-1	M5A8F1	160 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	TPP1	O14773	563 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	LZTS3	O60299	673 aa	Predicted RBP	13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	ZIC2	O95409	532 aa	Predicted RBP	13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	CD160	O95971	181 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	TGM2	P21980	687 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	SNRPD1	P62314	119 aa	Known RBP	13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	ATP11A	P98196	1134 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	RHD	Q02161	417 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	CFHR1	Q03591	330 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	PTK2B	Q14289	1009 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	POLD3	Q15054	466 aa	Predicted RBP	13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	CDKN3	Q16667	212 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	ARL13B	Q3SXY8	428 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	TAF1B	Q53T94	588 aa	Predicted RBP	13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	ZNF805	Q5CZA5	627 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	MIIP	Q5JXC2	388 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	KLHDC7A	Q5VTJ3	777 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	ZNF843	Q8N446	348 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	DENND6B	Q8NEG7	585 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	LMX1A	Q8TE12	382 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	TUBGCP2	Q9BSJ2	902 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	DPH1	Q9BZG8	443 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	THSD1	Q9NS62	852 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	SPAST	Q9UBP0	616 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	OR12D3	Q9UGF7	316 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	KLF15	Q9UIH9	416 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	HPCAL4	Q9UM19	191 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	FHOD1	Q9Y613	1164 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	ACTL7A	Q9Y615	435 aa		13.91	□□□□□ -0.18
UBA1-205	ENST00000427561	RP1	P56715	2156 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	FAM170A	A1A519	330 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	EME2	A4GXA9	379 aa	Predicted RBP	13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	PES1	O00541	588 aa	Known RBP	13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	KLK10	O43240	276 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	SPINT1	O43278	529 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	POP4	O95707	220 aa	Known RBP	13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	RBMS1	P29558	406 aa	Known RBP	13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	ADRA1B	P35368	520 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	ACVRL1	P37023	503 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	ABL2	P42684	1182 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	MAPKAPK2	P49137	400 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	RPIA	P49247	311 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	THOP1	P52888	689 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	PFN3	P60673	137 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	UBE2H	P62256	183 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	NOMO3	P69849	1222 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	NRG1	Q02297	640 aa	Predicted RBP	13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	NR0B2	Q15466	257 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	DEFB133	Q30KQ1	61 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	IGF2-AS	Q6U949	168 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	NOP9	Q86U38	636 aa	Known RBP	13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	OR2AP1	Q8NGE2	309 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	CPA5	Q8WXQ8	436 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	ARHGEF2	Q92974	986 aa	Known RBP	13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	GLMN	Q92990	594 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	WBP1	Q96G27	269 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	VCPIP1	Q96JH7	1222 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	OSBPL1A	Q9BXW6	950 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	MAGEH1	Q9H213	219 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	ASCL3	Q9NQ33	180 aa		13.9	□□□□□ -0.18
UBA1-205	ENST00000427561	DNAI1	Q9UI46	699 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms