RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 KCNK1O00180 336 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 KRIT1O00522 736 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 INSIG1O15503 277 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 C5AR1P21730 350 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 MSNP26038 577 aaKnown RBP24.83■■□□□ 1.57
VEGFA-209ENST00000425836 CNR2P34972 360 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 CSNK1DP48730 415 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 OTUD4Q01804 1114 aaKnown RBP24.83■■□□□ 1.57
VEGFA-209ENST00000425836 BYSLQ13895 437 aaKnown RBP24.83■■□□□ 1.57
VEGFA-209ENST00000425836 PRKD1Q15139 912 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-209ENST00000425836 NOMO1Q15155 1222 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 ZC3H18Q86VM9 953 aaKnown RBP24.83■■□□□ 1.57
VEGFA-209ENST00000425836 BBS5Q8N3I7 341 aa24.83■■□□□ 1.57
VEGFA-209ENST00000425836 FAM160A2Q8N612 972 aaPredicted RBP24.83■■□□□ 1.57
VEGFA-209ENST00000425836 TFB1MQ8WVM0 346 aaKnown RBP24.83■■□□□ 1.57
VEGFA-209ENST00000425836 RBM22Q9NW64 420 aaKnown RBP eCLIP24.83■■□□□ 1.574e-11■■■■□ 26.1
VEGFA-209ENST00000425836 RPP40O75818 363 aaKnown RBP24.82■■□□□ 1.56
VEGFA-209ENST00000425836 IGLV3-19P01714 112 aa24.82■■□□□ 1.56
VEGFA-209ENST00000425836 ATP1A1P05023 1023 aaKnown RBP24.82■■□□□ 1.56
VEGFA-209ENST00000425836 HSPA9P38646 679 aaKnown RBP24.82■■□□□ 1.56
VEGFA-209ENST00000425836 POM121L1PQ3SYA9 428 aa24.82■■□□□ 1.56
VEGFA-209ENST00000425836 TTC31Q49AM3 519 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-209ENST00000425836 SLC13A5Q86YT5 568 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-209ENST00000425836 AADATQ8N5Z0 425 aa24.82■■□□□ 1.56
VEGFA-209ENST00000425836 MGME1Q9BQP7 344 aa24.82■■□□□ 1.56
VEGFA-209ENST00000425836 FBXL12Q9NXK8 326 aa24.82■■□□□ 1.56
VEGFA-209ENST00000425836 SERGEFQ9UGK8 458 aa24.82■■□□□ 1.56
VEGFA-209ENST00000425836 IGHV1OR15-9A0A0B4J2B8 117 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 GJB3O75712 270 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 JCHAINP01591 159 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 CXCR5P32302 372 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 GNG11P61952 73 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 IFI35P80217 286 aaPredicted RBP24.81■■□□□ 1.56
VEGFA-209ENST00000425836 XRCC4Q13426 336 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 ZC3H14Q6PJT7 736 aaKnown RBP24.81■■□□□ 1.56
VEGFA-209ENST00000425836 SRLQ86TD4 932 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 LRIG1Q96JA1 1093 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 FAM118BQ9BPY3 351 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 CPEB1Q9BZB8 566 aaKnown RBP24.81■■□□□ 1.56
VEGFA-209ENST00000425836 NT5MQ9NPB1 228 aa24.81■■□□□ 1.56
VEGFA-209ENST00000425836 MBD1Q9UIS9 605 aaPredicted RBP24.81■■□□□ 1.56
VEGFA-209ENST00000425836 A0A1W2PP55 124 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 HACD1B0YJ81 288 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 KPNA3O00505 521 aaPredicted RBP24.8■■□□□ 1.56
VEGFA-209ENST00000425836 CR2P20023 1033 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 DRD3P35462 400 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 MAXP61244 160 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 RAD51Q06609 339 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 ZBTB17Q13105 803 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 FAM182AQ5T1J6 154 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 USP30Q70CQ3 517 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 HDDC3Q8N4P3 179 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 GANCQ8TET4 914 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 SPACA7Q96KW9 195 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 QKIQ96PU8 341 aaKnown RBP eCLIP24.8■■□□□ 1.56
VEGFA-209ENST00000425836 IL12RB2Q99665 862 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 FAM86C1Q9NVL1 165 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 TTC24A2A3L6 582 aaPredicted RBP24.8■■□□□ 1.56
VEGFA-209ENST00000425836 PLK4O00444 970 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 RNASEH2AO75792 299 aaKnown RBP24.8■■□□□ 1.56
VEGFA-209ENST00000425836 BCKDHBP21953 392 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 SCNN1BP51168 640 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 SFSWAPQ12872 951 aaKnown RBP24.8■■□□□ 1.56
VEGFA-209ENST00000425836 HS1BP3Q53T59 392 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 FAM124AQ86V42 546 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 TTC13Q8NBP0 860 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 ARRDC3Q96B67 414 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 NSMCE3Q96MG7 304 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 OMDQ99983 421 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 NEUROG2Q9H2A3 272 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 SEPT10Q9P0V9 454 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 AMACRQ9UHK6 382 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 NCKAP1Q9Y2A7 1128 aa24.8■■□□□ 1.56
VEGFA-209ENST00000425836 R3HDM2Q9Y2K5 976 aaKnown RBP24.8■■□□□ 1.56
VEGFA-209ENST00000425836 H7C0C1 242 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 CEP104O60308 925 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 UGT2B4P06133 528 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 CD6P30203 668 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 OXTRP30559 389 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 ATP5OP48047 213 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 EIF3EP60228 445 aaKnown RBP24.79■■□□□ 1.56
VEGFA-209ENST00000425836 CNTN1Q12860 1018 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 SLC45A4Q5BKX6 768 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 GDPD4Q6W3E5 623 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 KBTBD6Q86V97 674 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 CNTD1Q8N815 330 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 NUDCD1Q96RS6 583 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 WDR24Q96S15 920 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 OSBPL1AQ9BXW6 950 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 C10orf88Q9H8K7 445 aa24.79■■□□□ 1.56
VEGFA-209ENST00000425836 WSB2Q9NYS7 404 aaPredicted RBP24.79■■□□□ 1.56
VEGFA-209ENST00000425836 HLA-DQB2P05538 268 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 RBP3P10745 1247 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 AP1S1P61966 158 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 NCEH1Q6PIU2 408 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.78■■□□□ 1.56
VEGFA-209ENST00000425836 ADAT2Q7Z6V5 191 aaKnown RBP24.78■■□□□ 1.56
VEGFA-209ENST00000425836 FAM131CQ96AQ9 280 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 TOE1Q96GM8 510 aaKnown RBP24.78■■□□□ 1.56
VEGFA-209ENST00000425836 TUBGCP5Q96RT8 1024 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms