RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SLFN11Q7Z7L1 901 aa12.98□□□□□ -0.33
SGCE-203ENST00000425444 ZNF354CQ86Y25 554 aa12.98□□□□□ -0.33
SGCE-203ENST00000425444 TTC9Q92623 222 aa12.98□□□□□ -0.33
SGCE-203ENST00000425444 CENPIQ92674 756 aaPredicted RBP12.98□□□□□ -0.33
SGCE-203ENST00000425444 NTAN1Q96AB6 310 aa12.98□□□□□ -0.33
SGCE-203ENST00000425444 OSBPL2Q9H1P3 480 aa12.98□□□□□ -0.33
SGCE-203ENST00000425444 TAS2R14Q9NYV8 317 aa12.98□□□□□ -0.33
SGCE-203ENST00000425444 ADAMTS1Q9UHI8 967 aa12.98□□□□□ -0.33
SGCE-203ENST00000425444 HEMK1Q9Y5R4 338 aaPredicted RBP12.98□□□□□ -0.33
SGCE-203ENST00000425444 ARID1BQ8NFD5 2236 aaPredicted RBP12.98□□□□□ -0.33
SGCE-203ENST00000425444 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3DA0A087WVF3 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3IA0A087WXS9 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3EA0A087X179 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3KA0A087X1G2 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3FA6NER0 549 aaPredicted RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3LB9A6J9 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 FAM72CH0Y354 149 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 K7ERQ8 282 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 KPNA3O00505 521 aaPredicted RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 MCF2LO15068 1137 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 DFNA5O60443 496 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 LRIG2O94898 1065 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 IGHV4-34P06331 123 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 PLEKP08567 350 aaPredicted RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3HP0C7X1 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 RHOQP17081 205 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 CTSKP43235 329 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 MAPKAPK2P49137 400 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 ACADVLP49748 655 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 METAP1P53582 386 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 UBASH3AP57075 661 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 PCBP4P57723 403 aaKnown RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 RPL7AP62424 266 aaKnown RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 NRG1Q02297 640 aaPredicted RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 NR1I3Q14994 352 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 ZSCAN23Q3MJ62 389 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TDRD12Q587J7 1177 aaKnown RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 FAM72AQ5TYM5 149 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 MANEALQ5VSG8 457 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3GQ6DHY5 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3CQ6IPX1 549 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 FAM72DQ6L9T8 149 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 ZNF571Q7Z3V5 609 aaPredicted RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 FAM72BQ86X60 149 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TBC1D3Q8IZP1 549 aaPredicted RBP12.97□□□□□ -0.33
SGCE-203ENST00000425444 GRIN3AQ8TCU5 1115 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 VCPIP1Q96JH7 1222 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 CNPY3Q9BT09 278 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 SYT11Q9BT88 431 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 EDEM3Q9BZQ6 932 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 FAM117AQ9C073 453 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TTYH3Q9C0H2 523 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 TNKS2Q9H2K2 1166 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 DYRK4Q9NR20 520 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 PARVAQ9NVD7 372 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 AIPL1Q9NZN9 384 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 DNAI1Q9UI46 699 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 SARDHQ9UL12 918 aa12.97□□□□□ -0.33
SGCE-203ENST00000425444 A0A1W2PPC4 97 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 TCRBV5S1A1TA0A578 114 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 SLC7A4O43246 635 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 SMAD6O43541 496 aaKnown RBP12.96□□□□□ -0.33
SGCE-203ENST00000425444 RAMP2O60895 175 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 RTN2O75298 545 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 PRNPP04156 253 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 PSMA2P25787 234 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 EPHB2P29323 1055 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 CHRNA3P32297 505 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 DRD3P35462 400 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 ACVRL1P37023 503 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 SERPINH1P50454 418 aaKnown RBP12.96□□□□□ -0.33
SGCE-203ENST00000425444 DNA2P51530 1060 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 C21orf59P57076 290 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 RACK1P63244 317 aaKnown RBP12.96□□□□□ -0.33
SGCE-203ENST00000425444 CNTN1Q12860 1018 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
SGCE-203ENST00000425444 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 PRAMEF14Q5SWL7 426 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 E4F1Q66K89 784 aaPredicted RBP12.96□□□□□ -0.33
SGCE-203ENST00000425444 TMC6Q7Z403 805 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 OR2A12Q8NGT7 310 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 ZNF653Q96CK0 615 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 SLC6A18Q96N87 628 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 EPAS1Q99814 870 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 ACE2Q9BYF1 805 aaPredicted RBP12.96□□□□□ -0.33
SGCE-203ENST00000425444 MAGEB5Q9BZ81 275 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 RETREG1Q9H6L5 497 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 AASDHPPTQ9NRN7 309 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 NDFIP2Q9NV92 336 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 TMEM248Q9NWD8 314 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 ZNF212Q9UDV6 495 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 PPM1HQ9ULR3 514 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 HPCAL4Q9UM19 191 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 CLCA2Q9UQC9 943 aa12.96□□□□□ -0.33
SGCE-203ENST00000425444 A0A1B0GTQ1 180 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 KLK10O43240 276 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 CREB3O43889 395 aa12.95□□□□□ -0.34
SGCE-203ENST00000425444 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms