RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 C2orf49Q9BVC5 232 aaPredicted RBP13.23□□□□□ -0.29
VRK3-203ENST00000424804 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 NDFIP2Q9NV92 336 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 KLHL11Q9NVR0 708 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 TAS2R14Q9NYV8 317 aa13.23□□□□□ -0.29
VRK3-203ENST00000424804 ILVBLA1L0T0 632 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 KPNA3O00505 521 aaPredicted RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 RAD51BO15315 384 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 SPINT1O43278 529 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 ATMINO43313 823 aaPredicted RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 SRGAP2O75044 1071 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 LEFTY1O75610 366 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 THEGLP0DJG4 465 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 RFC1P35251 1148 aaPredicted RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 EIF2S3P41091 472 aaKnown RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 CLCN6P51797 869 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 CLDN2P57739 230 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 ZNF211Q13398 564 aaPredicted RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 ILKQ13418 452 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 ACAP1Q15027 740 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 TPRG1LQ5T0D9 272 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 ERN2Q76MJ5 926 aaKnown RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 MON1BQ7L1V2 547 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 ZNF571Q7Z3V5 609 aaPredicted RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 KLF6Q99612 283 aaPredicted RBP13.22□□□□□ -0.29
VRK3-203ENST00000424804 MYOCQ99972 504 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 TTYH3Q9C0H2 523 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 NRSN2Q9GZP1 204 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 FADS3Q9Y5Q0 445 aa13.22□□□□□ -0.29
VRK3-203ENST00000424804 POM121BA6NF01 834 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 FAM72CH0Y354 149 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 MAGEC1O60732 1142 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 PIAS2O75928 621 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 PRNPP04156 253 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 MYF5P13349 255 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 OR1E1P30953 314 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 ACVRL1P37023 503 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 SERPINH1P50454 418 aaKnown RBP13.21□□□□□ -0.29
VRK3-203ENST00000424804 ARL13BQ3SXY8 428 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 FAM72AQ5TYM5 149 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 CDCP2Q5VXM1 449 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 FAM72DQ6L9T8 149 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 SCYL2Q6P3W7 929 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 WDR59Q6PJI9 974 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 LRRC31Q6UY01 552 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 ZNF783Q6ZMS7 281 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 KDM7AQ6ZMT4 941 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 NLRP14Q86W24 1093 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 FAM72BQ86X60 149 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 C3orf20Q8ND61 904 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 OR4C6Q8NH72 309 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 PRORYQ9H606 182 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 MYO1AQ9UBC5 1043 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 PPARGC1AQ9UBK2 798 aaKnown RBP13.21□□□□□ -0.29
VRK3-203ENST00000424804 IL36AQ9UHA7 158 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 KLF15Q9UIH9 416 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 FCF1Q9Y324 198 aaKnown RBP13.21□□□□□ -0.29
VRK3-203ENST00000424804 LUC7L2Q9Y383 392 aaKnown RBP13.21□□□□□ -0.29
VRK3-203ENST00000424804 RAI2Q9Y5P3 530 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 HS3ST3A1Q9Y663 406 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 KALRNO60229 2985 aa13.21□□□□□ -0.29
VRK3-203ENST00000424804 RP1P56715 2156 aa13.21□□□□□ -0.3
VRK3-203ENST00000424804 HELZ2Q9BYK8 2649 aaKnown RBP13.21□□□□□ -0.3
VRK3-203ENST00000424804 C2CD4BA6NLJ0 364 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 SIGLEC16A6NMB1 481 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 CCP110O43303 1012 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 DESP17661 470 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 HNRNPA2B1P22626 353 aaKnown RBP13.2□□□□□ -0.3
VRK3-203ENST00000424804 CASP14P31944 242 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 L1CAMP32004 1257 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 ADRA1BP35368 520 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 PBX1P40424 430 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 RPL7AP62424 266 aaKnown RBP13.2□□□□□ -0.3
VRK3-203ENST00000424804 ZBED6P86452 979 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 NRG1Q02297 640 aaPredicted RBP13.2□□□□□ -0.3
VRK3-203ENST00000424804 GNA12Q03113 381 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 SLC20A2Q08357 652 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 FZD2Q14332 565 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 CARD16Q5EG05 197 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 FIGNQ5HY92 759 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 C6orf118Q5T5N4 469 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 ACBD5Q5T8D3 534 aaPredicted RBP13.2□□□□□ -0.3
VRK3-203ENST00000424804 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 GRIN3AQ8TCU5 1115 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 CENPIQ92674 756 aaPredicted RBP13.2□□□□□ -0.3
VRK3-203ENST00000424804 ZNF653Q96CK0 615 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 NXPE2Q96DL1 559 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 SPON2Q9BUD6 331 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 ZYG11BQ9C0D3 744 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 CEP44Q9C0F1 390 aa13.2□□□□□ -0.3
VRK3-203ENST00000424804 PNMA8BQ9ULN7 279 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms