RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 FAM153CQ494X1 144 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 ZNF783Q6ZMS7 281 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 CHPFQ8IZ52 775 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 SLC25A41Q8N5S1 370 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 ARRDC2Q8TBH0 407 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 ACDQ96AP0 544 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 SLC2A11Q9BYW1 496 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 FAM153AQ9UHL3 310 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 UQCRHLA0A096LP55 91 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 E7EVH7 732 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 PLK4O00444 970 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 STK10O94804 968 aaKnown RBP13.63□□□□□ -0.23
PRPF39-202ENST00000424478 SEC31AO94979 1220 aaKnown RBP13.63□□□□□ -0.23
PRPF39-202ENST00000424478 APODP05090 189 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 UQCRHP07919 91 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 TPH1P17752 444 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 LMAN1P49257 510 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 C22orf39Q6P5X5 142 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 ZDHHC24Q6UX98 284 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 SERPINA13PQ6UXR4 307 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 DPY19L3Q6ZPD9 716 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 CCDC25Q86WR0 208 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 CAMK1DQ8IU85 385 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 SIX5Q8N196 739 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRPF39-202ENST00000424478 SLCO2A1Q92959 643 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 ZDHHC6Q9H6R6 413 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 C2orf42Q9NWW7 574 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 SEPT3Q9UH03 358 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 FBXL21Q9UKT6 434 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 PLA2G4CQ9UP65 541 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 CFAP69A5D8W1 941 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 A8MX80 341 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 LMNB2Q03252 620 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 GALNT3Q14435 633 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 PUS10Q3MIT2 529 aaKnown RBP13.63□□□□□ -0.23
PRPF39-202ENST00000424478 TEX26Q8N6G2 289 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 ZNF513Q8N8E2 541 aaPredicted RBP13.63□□□□□ -0.23
PRPF39-202ENST00000424478 TTC17Q96AE7 1141 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 PSKH2Q96QS6 385 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 GBA3Q9H227 469 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 PAK5Q9P286 719 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 DUSP12Q9UNI6 340 aa13.63□□□□□ -0.23
PRPF39-202ENST00000424478 NUMA1Q14980 2115 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 FAM187AA6NFU0 413 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 STK25O00506 426 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 OPHN1O60890 802 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 PDHA1P08559 390 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 GRIA2P42262 883 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 FAM3CQ92520 227 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-202ENST00000424478 SORCS3Q9UPU3 1222 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 CHKBQ9Y259 395 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 ATP8A1Q9Y2Q0 1164 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 RNF40O75150 1001 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 ECHS1P30084 290 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 GJD3Q8N144 294 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 SNF8Q96H20 258 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 POLR1EQ9GZS1 481 aaKnown RBP13.62□□□□□ -0.23
PRPF39-202ENST00000424478 HECAQ9UBI9 543 aaPredicted RBP13.62□□□□□ -0.23
PRPF39-202ENST00000424478 ANAPC5Q9UJX4 755 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 HS3ST2Q9Y278 367 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 SDK1Q7Z5N4 2213 aa13.62□□□□□ -0.23
PRPF39-202ENST00000424478 DNALI1O14645 258 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 PDGFBP01127 241 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 SLC4A1P02730 911 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 ATP5BP06576 529 aaKnown RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 EPHX1P07099 455 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 ITIH2P19823 946 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 CCNHP51946 323 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 SLC12A1Q13621 1099 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 UBXN2BQ14CS0 331 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 MSS51Q4VC12 460 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 RNASEH2BQ5TBB1 312 aaKnown RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 KIAA1211LQ6NV74 962 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 CAPN12Q6ZSI9 719 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 OR52K1Q8NGK4 314 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 FRS2Q8WU20 508 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 PTPRN2Q92932 1015 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 VOPP1Q96AW1 172 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 FICDQ9BVA6 458 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 SCUBE2Q9NQ36 999 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 FASTKD3Q14CZ7 662 aaKnown RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 LRRC49Q8IUZ0 686 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 PAF1Q8N7H5 531 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 OR2A12Q8NGT7 310 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 FERMT1Q9BQL6 677 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 MGME1Q9BQP7 344 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 RAB17Q9H0T7 212 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 ARHGEF3Q9NR81 526 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 TPX2Q9ULW0 747 aaKnown RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 MYLKQ15746 1914 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 GON4LQ3T8J9 2241 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 SIN3BO75182 1162 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 CTSLP07711 333 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 SESN2P58004 480 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 TRAF2Q12933 501 aa13.61□□□□□ -0.23
PRPF39-202ENST00000424478 MLF2Q15773 248 aaPredicted RBP13.61□□□□□ -0.23
PRPF39-202ENST00000424478 FNBP1LQ5T0N5 605 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms