RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ATP6V1C1P21283 382 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 MAGEA6P43360 314 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 CCNHP51946 323 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 DLG1Q12959 904 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 ART3Q13508 389 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 SLC12A1Q13621 1099 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 FAM171A1Q5VUB5 890 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 SEL1L3Q68CR1 1132 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GK5Q6ZS86 529 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 ZC3HC1Q86WB0 502 aaKnown RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 PIP4K2CQ8TBX8 421 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GTF3C2Q8WUA4 911 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 HEXDCQ8WVB3 486 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 HDAC10Q969S8 669 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 EBF3Q9H4W6 596 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 PIF1Q9H611 641 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 UTP6Q9NYH9 597 aaKnown RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 SLC12A8A0AV02 714 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 PPP6CO00743 305 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 ALDH1A2O94788 518 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 MLNP12872 115 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 RALGDSQ12967 914 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 KLF10Q13118 480 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 KRT72Q14CN4 511 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 SPATA24Q86W54 205 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 PHC3Q8NDX5 983 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 PPHLN1Q8NEY8 458 aaKnown RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 OR9I1Q8NGQ6 314 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 RSPH1Q8WYR4 309 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 IL22Q9GZX6 179 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GLOD4Q9HC38 313 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GEMIN8Q9NWZ8 242 aaKnown RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GMPR2Q9P2T1 348 aaKnown RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 FAM50BQ9Y247 325 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 HS3ST4Q9Y661 456 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 V9GYQ6 96 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 HHLA1C9JL84 531 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 E9PAM4 449 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 TRAFD1O14545 582 aaPredicted RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 KLF11O14901 512 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GPR182O15218 404 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 BIRC5O15392 142 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 DLX3O60479 287 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 LRPAP1P30533 357 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 C4orf22Q6V702 233 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 ARCQ7LC44 396 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 TMEM135Q86UB9 458 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 HBEGFQ99075 208 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 CDH19Q9H159 772 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 FBRSL1Q9HCM7 1045 aaKnown RBP13.51□□□□□ -0.25
MCF2L-213ENST00000421756 FBXO5Q9UKT4 447 aa13.51□□□□□ -0.25
MCF2L-213ENST00000421756 TPST1O60507 370 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ACVRL1P37023 503 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 SEMG2Q02383 582 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 NSUN2Q08J23 767 aaKnown RBP eCLIP13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ANO4Q32M45 955 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 STEAP4Q687X5 459 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 EFHBQ8N7U6 833 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 NT5C3BQ969T7 300 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 NAT9Q9BTE0 207 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 CASS4Q9NQ75 786 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 SMPD4Q9NXE4 827 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 CDH22Q9UJ99 828 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 KIAA0100Q14667 2235 aaKnown RBP13.5□□□□□ -0.25
MCF2L-213ENST00000421756 CAPN8A6NHC0 703 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 GPC4O75487 556 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 F9P00740 461 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 SLC35E2BP0CK96 405 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ITGAXP20702 1163 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 GPR158Q5T848 1215 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 SCD5Q86SK9 330 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 KCTD13Q8WZ19 329 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 COPS7BQ9H9Q2 264 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-213ENST00000421756 BPIFA1Q9NP55 256 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 UXTQ9UBK9 157 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-213ENST00000421756 CDY1Q9Y6F8 540 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 KLHL2O95198 593 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 SIX3O95343 332 aaPredicted RBP13.5□□□□□ -0.25
MCF2L-213ENST00000421756 GRK2P25098 689 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 CNTFP26441 200 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ARSDP51689 593 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 TUBB3Q13509 450 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 DNAL1Q4LDG9 190 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 RPL10LQ96L21 214 aaKnown RBP13.5□□□□□ -0.25
MCF2L-213ENST00000421756 TBATAQ96M53 351 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 FAM96AQ9H5X1 160 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ADAMTS6Q9UKP5 1117 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ANGPTL2Q9UKU9 493 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 COMMD10Q9Y6G5 202 aa13.5□□□□□ -0.25
MCF2L-213ENST00000421756 ERI2A8K979 691 aaKnown RBP13.49□□□□□ -0.25
MCF2L-213ENST00000421756 HAS3O00219 553 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 GPR39O43194 453 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 TIMM44O43615 452 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 AQP4P55087 323 aa13.49□□□□□ -0.25
MCF2L-213ENST00000421756 GALNT2Q10471 571 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms