RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 FAM102AQ5T9C2 384 aaPredicted RBP17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 PARS2Q7L3T8 475 aaKnown RBP17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 TPCN2Q8NHX9 752 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 SNRNP27Q8WVK2 155 aaKnown RBP17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 ASB12Q8WXK4 309 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 RAB7BQ96AH8 199 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 VCPIP1Q96JH7 1222 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 ZYG11BQ9C0D3 744 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 SSUH2Q9Y2M2 353 aa17.17■□□□□ 0.34
UPF3AP3-201ENST00000420996 CXorf51AA0A1B0GTR3 108 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 EME2A4GXA9 379 aaPredicted RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 IGLON5A6NGN9 336 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 TPP1O14773 563 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 TSPAN6O43657 245 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 PNMA6AP0CW24 399 aaPredicted RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 JUNDP17535 347 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 RBMS1P29558 406 aaKnown RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 PDE1CQ14123 709 aaPredicted RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 C3orf38Q5JPI3 329 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 GUSBP11Q6P575 273 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 EFL1Q7Z2Z2 1120 aaKnown RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 BNIPLQ7Z465 357 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 XYLT1Q86Y38 959 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 BTN2A2Q8WVV5 523 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 ISG20Q96AZ6 181 aaKnown RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 SLC46A1Q96NT5 459 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 IL12RB2Q99665 862 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 PDCL3Q9H2J4 239 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 ZDHHC6Q9H6R6 413 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 SATB2Q9UPW6 733 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 FCF1Q9Y324 198 aaKnown RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 ENTPD2Q9Y5L3 495 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 CHD5Q8TDI0 1954 aa17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 SETXQ7Z333 2677 aaKnown RBP17.16■□□□□ 0.34
UPF3AP3-201ENST00000420996 A0A1W2PNU3 283 aaPredicted RBP17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 C16orf96A6NNT2 1141 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 J3QKU1 62 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 SPINT1O43278 529 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 GADD45BO75293 160 aaPredicted RBP17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 CD160O95971 181 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 FLT3P36888 993 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 MTIF2P46199 727 aaKnown RBP17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 PFN3P60673 137 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 VAC14Q08AM6 782 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 EIF2B5Q13144 721 aaKnown RBP17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 NR0B2Q15466 257 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 DEFB133Q30KQ1 61 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 TPRG1LQ5T0D9 272 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 DRC7Q8IY82 874 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 DENND6BQ8NEG7 585 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 LMX1AQ8TE12 382 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 CCDC97Q96F63 343 aaPredicted RBP17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 ATXN7L3BQ96GX2 97 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 KIAA1468Q9P260 1216 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 PPARGC1AQ9UBK2 798 aaKnown RBP17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 RP1P56715 2156 aa17.15■□□□□ 0.34
UPF3AP3-201ENST00000420996 NEMP1O14524 444 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 TCEA3O75764 348 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 CYP11B1P15538 503 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 ETFBP38117 255 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 ABL2P42684 1182 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 SKOR1P84550 965 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 BECN1Q14457 450 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 ZNF805Q5CZA5 627 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 TRNP1Q6NT89 227 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 DPY19L2P1Q6NXN4 242 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 RBM44Q6ZP01 1051 aaKnown RBP17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 ARCQ7LC44 396 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 FAM131BQ86XD5 332 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 TTC9Q92623 222 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 GLMNQ92990 594 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 PRR11Q96HE9 360 aaPredicted RBP17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 CFAP57Q96MR6 1250 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 BOCQ9BWV1 1114 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 TM6SF2Q9BZW4 377 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 SPASTQ9UBP0 616 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 TMEM59LQ9UK28 342 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 PCDHGA8Q9Y5G5 932 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 ACTL7AQ9Y615 435 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 COL6A6A6NMZ7 2263 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 ATMQ13315 3056 aa17.14■□□□□ 0.33
UPF3AP3-201ENST00000420996 GOLGA8SH3BPF8 625 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 RPIAP49247 311 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 GEMIN4P57678 1058 aaKnown RBP17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 PTK2BQ14289 1009 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 DRAP1Q14919 205 aaPredicted RBP17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 KIF26BQ2KJY2 2108 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 RYBPQ8N488 228 aaPredicted RBP17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 MSANTD4Q8NCY6 345 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 WDR48Q8TAF3 677 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 CENPTQ96BT3 561 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 ARHGEF26Q96DR7 871 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 TBATAQ96M53 351 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 RETREG1Q9H6L5 497 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 ZNF462Q96JM2 2506 aa17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 ASH1LQ9NR48 2969 aaKnown RBP17.13■□□□□ 0.33
UPF3AP3-201ENST00000420996 CFAP46Q8IYW2 2715 aa17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 FLNBO75369 2602 aaKnown RBP17.12■□□□□ 0.33
UPF3AP3-201ENST00000420996 CDRT15L2A8MXV6 281 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms