RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 PIGNO95427 931 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 IGSF6O95976 241 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 UGT2B4P06133 528 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 C7P10643 843 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 MX2P20592 715 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 CCNCP24863 283 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 CXCR5P32302 372 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 DRD3P35462 400 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 MMP13P45452 471 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 OTUD4Q01804 1114 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 ZBTB17Q13105 803 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 ZNF235Q14590 738 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 RFTN1Q14699 578 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 PDK1Q15118 436 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 MYLK3Q32MK0 819 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 USP39Q53GS9 565 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 CCDC181Q5TID7 509 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 PRR23BQ6ZRT6 265 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 ADAT2Q7Z6V5 191 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 KBTBD6Q86V97 674 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 CCDC13Q8IYE1 715 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 DEFB119Q8N690 84 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 ACTL9Q8TC94 416 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 GANCQ8TET4 914 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 MAML1Q92585 1016 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 ZNF599Q96NL3 588 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 TSGA13Q96PP4 275 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 NT5MQ9NPB1 228 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 FBXL12Q9NXK8 326 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 SEPT10Q9P0V9 454 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 SEPT3Q9UH03 358 aa12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 R3HDM2Q9Y2K5 976 aaKnown RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
AC004540.1-205ENST00000420774 PLXNA2O75051 1894 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 C1QTNF3-AMACRE9PGA6 284 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 APOC4-APOC2K7ER74 178 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 PPP1R12AO14974 1030 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 KIF5CO60282 957 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 ZNF217O75362 1048 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 RNASEH2AO75792 299 aaKnown RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 ADH1BP00325 375 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 APOC2P02655 101 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 ATP1A1P05023 1023 aaKnown RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 CCNB1P14635 433 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 ACSL1P33121 698 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 NR2C2P49116 596 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 SCNN1BP51168 640 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 NHLH1Q02575 133 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 CNTN1Q12860 1018 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 KLF1Q13351 362 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 PRKD1Q15139 912 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 NOMO1Q15155 1222 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 TTC31Q49AM3 519 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 LRRC73Q5JTD7 316 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 SEL1L2Q5TEA6 688 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 MARC1Q5VT66 337 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 TIGD7Q6NT04 549 aaPredicted RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 ZC3H14Q6PJT7 736 aaKnown RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 DSG4Q86SJ6 1040 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 LRRC49Q8IUZ0 686 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 PLPP6Q8IY26 295 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 HDDC3Q8N4P3 179 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 TEX26Q8N6G2 289 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 TMIEQ8NEW7 156 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 NSMCE1Q8WV22 266 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 TOE1Q96GM8 510 aaKnown RBP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 SPACA7Q96KW9 195 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 PSKH2Q96QS6 385 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 MGME1Q9BQP7 344 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 NEUROG2Q9H2A3 272 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 RBM22Q9NW64 420 aaKnown RBP eCLIP12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 EFR3BQ9Y2G0 817 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 TTLL3Q9Y4R7 772 aa12.85□□□□□ -0.35
AC004540.1-205ENST00000420774 LRRK1Q38SD2 2015 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 TJP3O95049 919 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 POP4O95707 220 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 JCHAINP01591 159 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 IGLV3-19P01714 112 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 PRNPP04156 253 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 CR2P20023 1033 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 C5AR1P21730 350 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 CD6P30203 668 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 CETN2P41208 172 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 NBL1P41271 181 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 ZBTB16Q05516 673 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 HNRNPDQ14103 355 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 SIM2Q14190 667 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 IHHQ14623 411 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 CEP68Q76N32 757 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 PARS2Q7L3T8 475 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 ARMCX6Q7L4S7 300 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 SRLQ86TD4 932 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 TMEFF1Q8IYR6 380 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 CNTD1Q8N815 330 aa12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 TFB1MQ8WVM0 346 aaKnown RBP12.84□□□□□ -0.35
AC004540.1-205ENST00000420774 KLHL32Q96NJ5 620 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms