RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 MAP3K13O43283 966 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 RHOBTB1O94844 696 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 MAP3K6O95382 1288 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 DRD3P35462 400 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 MMP13P45452 471 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 XRCC4Q13426 336 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 ZNF235Q14590 738 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 ELF2Q15723 593 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 PLK5Q496M5 336 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 ARSIQ5FYB1 569 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 RALGPS1Q5JS13 557 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 ATXN7L2Q5T6C5 722 aaPredicted RBP16.71■□□□□ 0.27
LINC00398-201ENST00000414407 PMS2CLQ68D20 193 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 NPNTQ6UXI9 565 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 RYBPQ8N488 228 aaPredicted RBP16.71■□□□□ 0.27
LINC00398-201ENST00000414407 AADATQ8N5Z0 425 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 SUMF1Q8NBK3 374 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 HCAR2Q8TDS4 363 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 VOPP1Q96AW1 172 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 TOE1Q96GM8 510 aaKnown RBP16.71■□□□□ 0.27
LINC00398-201ENST00000414407 LOXL4Q96JB6 756 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 TUBGCP5Q96RT8 1024 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 LGMNQ99538 433 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 OMDQ99983 421 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 MGME1Q9BQP7 344 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 HEMGNQ9BXL5 484 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 BTBD1Q9H0C5 482 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 DUSP15Q9H1R2 295 aaPredicted RBP16.71■□□□□ 0.27
LINC00398-201ENST00000414407 CARD9Q9H257 536 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 RAB23Q9ULC3 237 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 INVSQ9Y283 1065 aa16.71■□□□□ 0.27
LINC00398-201ENST00000414407 A0A1W2PP55 124 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 HACD1B0YJ81 288 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 KPNA3O00505 521 aaPredicted RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 KRIT1O00522 736 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 NDUFS2O75306 463 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 RNASEH2AO75792 299 aaKnown RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 LMNAP02545 664 aaKnown RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 CCNB1P14635 433 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 BCKDHBP21953 392 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 CES1P23141 567 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 ITGB7P26010 798 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 MSNP26038 577 aaKnown RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 AP1S1P61966 158 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 IFI35P80217 286 aaPredicted RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 LLGL1Q15334 1064 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 DCAF12L1Q5VU92 463 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 LPCAT2Q7L5N7 544 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 SRLQ86TD4 932 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 HDDC3Q8N4P3 179 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 FAM160A2Q8N612 972 aaPredicted RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 FRMD1Q8N878 549 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 CADM4Q8NFZ8 388 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 GRIN3AQ8TCU5 1115 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 GANCQ8TET4 914 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 NKD2Q969F2 451 aaPredicted RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 ZNF641Q96N77 438 aaPredicted RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 HDAC8Q9BY41 377 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 NEUROG2Q9H2A3 272 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 KDM4CQ9H3R0 1056 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 ZDHHC6Q9H6R6 413 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 CD93Q9NPY3 652 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 DYRK4Q9NR20 520 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 EVLQ9UI08 416 aaPredicted RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 SMG5Q9UPR3 1016 aaKnown RBP16.7■□□□□ 0.26
LINC00398-201ENST00000414407 JRKLQ9Y4A0 524 aa16.7■□□□□ 0.26
LINC00398-201ENST00000414407 MUSKO15146 869 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 MTSS1O43312 755 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 PECAM1P16284 738 aaPredicted RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 CR2P20023 1033 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 RGRP47804 291 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 RPL6Q02878 288 aaKnown RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 AP1B1Q10567 949 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 ZNF211Q13398 564 aaPredicted RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 PRKD1Q15139 912 aaPredicted RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 NOMO1Q15155 1222 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 ZNF805Q5CZA5 627 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 SEL1L2Q5TEA6 688 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 CCDC181Q5TID7 509 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 ALG1LQ6GMV1 187 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 LAIR1Q6GTX8 287 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 AADACL2Q6P093 401 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 GDPD4Q6W3E5 623 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 PRR23BQ6ZRT6 265 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 ERN2Q76MJ5 926 aaKnown RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 PGBD5Q8N414 524 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 OR6K2Q8NGY2 324 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 FOXJ1Q92949 421 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 ARRDC3Q96B67 414 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 ZNF419Q96HQ0 510 aaPredicted RBP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 EXOC2Q96KP1 924 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 NUDCD1Q96RS6 583 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 IL12RB2Q99665 862 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 TLR10Q9BXR5 811 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 KCND1Q9NSA2 647 aa16.69■□□□□ 0.26
LINC00398-201ENST00000414407 RBM22Q9NW64 420 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC00398-201ENST00000414407 TRMT1Q9NXH9 659 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms