RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 ELMO2Q96JJ3 720 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 UBE2OQ9C0C9 1292 aaKnown RBP13.27□□□□□ -0.28
PRAME-201ENST00000398741 WDR41Q9HAD4 459 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 EFCAB1Q9HAE3 211 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 VPS28Q9UK41 221 aa13.27□□□□□ -0.28
PRAME-201ENST00000398741 TRPC5OSA6NMA1 111 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 HHLA1C9JL84 531 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
PRAME-201ENST00000398741 PIM1P11309 404 aaPredicted RBP13.27□□□□□ -0.29
PRAME-201ENST00000398741 ME2P23368 584 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 PCSK1P29120 753 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 PKNOX1P55347 436 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 NSUN2Q08J23 767 aaKnown RBP eCLIP13.27□□□□□ -0.29
PRAME-201ENST00000398741 PIGGQ5H8A4 983 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 FBXL19Q6PCT2 694 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 LSMEM2Q8N112 164 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 SPATA6LQ8N4H0 392 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 CATSPER1Q8NEC5 780 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 BHLHE22Q8NFJ8 381 aaPredicted RBP13.27□□□□□ -0.29
PRAME-201ENST00000398741 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.29
PRAME-201ENST00000398741 IRGQQ8WZA9 623 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 MYLPFQ96A32 169 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 FCRL5Q96RD9 977 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 OMDQ99983 421 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 UNKQ9C0B0 810 aaKnown RBP13.27□□□□□ -0.29
PRAME-201ENST00000398741 MRPL46Q9H2W6 279 aaKnown RBP13.27□□□□□ -0.29
PRAME-201ENST00000398741 ZNF385DQ9H6B1 395 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 ZBTB26Q9HCK0 441 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 NCKIPSDQ9NZQ3 722 aa13.27□□□□□ -0.29
PRAME-201ENST00000398741 GNEQ9Y223 722 aaKnown RBP13.27□□□□□ -0.29
PRAME-201ENST00000398741 TRPM7Q96QT4 1865 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 TSC2P49815 1807 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 PCNTO95613 3336 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 C15orf38-AP3S2A0A0A6YYH1 394 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 CACNG3O60359 315 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 TADA2AO75478 443 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 PGK1P00558 417 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 THP07101 528 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
PRAME-201ENST00000398741 CD151P48509 253 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 GEMP55040 296 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 C11orf91Q3C1V1 193 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 SH2D4BQ5SQS7 431 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 ESRP1Q6NXG1 681 aaKnown RBP13.26□□□□□ -0.29
PRAME-201ENST00000398741 BHLHA9Q7RTU4 235 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 ARPINQ7Z6K5 226 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 CEP97Q8IW35 865 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 RNF148Q8N7C7 305 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 DQX1Q8TE96 717 aaKnown RBP13.26□□□□□ -0.29
PRAME-201ENST00000398741 DPF3Q92784 378 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 DLG3Q92796 817 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 GAD1Q99259 594 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 FSD1LQ9BXM9 530 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 FTHL17Q9BXU8 183 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 OSBPL2Q9H1P3 480 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 GLOD4Q9HC38 313 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 VCX3AQ9NNX9 186 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 GTSE1Q9NYZ3 720 aa13.26□□□□□ -0.29
PRAME-201ENST00000398741 COPG1Q9Y678 874 aaKnown RBP13.26□□□□□ -0.29
PRAME-201ENST00000398741 ZNF638Q14966 1978 aaKnown RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 A0A087X1B8 175 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 MEIS3P2A8K0S8 358 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 TARM1B6A8C7 271 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 NPHS1O60500 1241 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 JUNP05412 331 aaKnown RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 CYP2C18P33260 490 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 MSX2P35548 267 aaPredicted RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 SLC1A2P43004 574 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 CPT1AP50416 773 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 FKBP1BP68106 108 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 DYNC1I2Q13409 638 aaKnown RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 ADGRE1Q14246 886 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 POTEHQ6S545 545 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 UGT2A3Q6UWM9 527 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 KLHDC8BQ8IXV7 354 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 PTCD2Q8WV60 388 aaKnown RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 BRI3BPQ8WY22 251 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 SGF29Q96ES7 293 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 TMA16Q96EY4 203 aaKnown RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 MRPL57Q9BQC6 102 aaKnown RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 TCAF1Q9Y4C2 921 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 TMEM233B4DJY2 109 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 HAS3O00219 553 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 ATXN3P54252 364 aaPredicted RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 CEACAM7Q14002 265 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 SEPT6Q14141 434 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 ZNF470Q6ECI4 717 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 PIWIL4Q7Z3Z4 852 aaKnown RBP13.25□□□□□ -0.29
PRAME-201ENST00000398741 ANKRD23Q86SG2 305 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 TMEM126BQ8IUX1 230 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 AFAP1L2Q8N4X5 818 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 CEP70Q8NHQ1 597 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 PPP1R2P1Q96PQ5 205 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 NPAS2Q99743 824 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 TRIM62Q9BVG3 475 aa13.25□□□□□ -0.29
PRAME-201ENST00000398741 COPS7BQ9H9Q2 264 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms