RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 MMP13P45452 471 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 AP1B1Q10567 949 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 HNRNPDQ14103 355 aaKnown RBP19.48■□□□□ 0.71
HOXA9-202ENST00000396345 POM121L1PQ3SYA9 428 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 CEP68Q76N32 757 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 FAM160A2Q8N612 972 aaPredicted RBP19.48■□□□□ 0.71
HOXA9-202ENST00000396345 FRMD1Q8N878 549 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 MAML1Q92585 1016 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 PSKH2Q96QS6 385 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 OMDQ99983 421 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 FBXL12Q9NXK8 326 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 EVLQ9UI08 416 aaPredicted RBP19.48■□□□□ 0.71
HOXA9-202ENST00000396345 NCKAP1Q9Y2A7 1128 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 JRKLQ9Y4A0 524 aa19.48■□□□□ 0.71
HOXA9-202ENST00000396345 PLXND1Q9Y4D7 1925 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 IGHV1OR15-9A0A0B4J2B8 117 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 KPNA3O00505 521 aaPredicted RBP19.47■□□□□ 0.71
HOXA9-202ENST00000396345 MAP3K13O43283 966 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 RNASEH2AO75792 299 aaKnown RBP19.47■□□□□ 0.71
HOXA9-202ENST00000396345 CCNB1P14635 433 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 RGRP47804 291 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 CSNK1DP48730 415 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 ZNF33AQ06730 810 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 NSUN2Q08J23 767 aaKnown RBP eCLIP19.47■□□□□ 0.71
HOXA9-202ENST00000396345 SIM2Q14190 667 aaPredicted RBP19.47■□□□□ 0.71
HOXA9-202ENST00000396345 USP30Q70CQ3 517 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 SRLQ86TD4 932 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 FAM124AQ86V42 546 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 C11orf74Q86VG3 221 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 SLC35F6Q8N357 371 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 HDDC3Q8N4P3 179 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 AADATQ8N5Z0 425 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 TEX26Q8N6G2 289 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 LRIG1Q96JA1 1093 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 CARD9Q9H257 536 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 NT5MQ9NPB1 228 aa19.47■□□□□ 0.71
HOXA9-202ENST00000396345 MBD1Q9UIS9 605 aaPredicted RBP19.47■□□□□ 0.71
HOXA9-202ENST00000396345 A0A1W2PP55 124 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 MUSKO15146 869 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 INSIG1O15503 277 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 NEBLO76041 1014 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 IGLV3-19P01714 112 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 BCKDHBP21953 392 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 CD6P30203 668 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 NBL1P41271 181 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 SCNN1BP51168 640 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 METAP1P53582 386 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 OTUD4Q01804 1114 aaKnown RBP19.46■□□□□ 0.71
HOXA9-202ENST00000396345 SLC36A4Q6YBV0 504 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 B4GALNT4Q76KP1 1039 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 KBTBD6Q86V97 674 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 ZC3H18Q86VM9 953 aaKnown RBP19.46■□□□□ 0.71
HOXA9-202ENST00000396345 ACTL9Q8TC94 416 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 TFB1MQ8WVM0 346 aaKnown RBP19.46■□□□□ 0.71
HOXA9-202ENST00000396345 TOE1Q96GM8 510 aaKnown RBP19.46■□□□□ 0.71
HOXA9-202ENST00000396345 PPP1R16AQ96I34 528 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 CPEB1Q9BZB8 566 aaKnown RBP19.46■□□□□ 0.71
HOXA9-202ENST00000396345 DYRK4Q9NR20 520 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 RBM22Q9NW64 420 aaKnown RBP eCLIP19.46■□□□□ 0.71
HOXA9-202ENST00000396345 WSB2Q9NYS7 404 aaPredicted RBP19.46■□□□□ 0.71
HOXA9-202ENST00000396345 SEPT10Q9P0V9 454 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 SERGEFQ9UGK8 458 aa19.46■□□□□ 0.71
HOXA9-202ENST00000396345 HACD1B0YJ81 288 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 KCNK1O00180 336 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 RNF103O00237 685 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 PLK4O00444 970 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 ENC1O14682 589 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 JCHAINP01591 159 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 UGT2B4P06133 528 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 IFI35P80217 286 aaPredicted RBP19.45■□□□□ 0.7
HOXA9-202ENST00000396345 CNTN1Q12860 1018 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 XRCC4Q13426 336 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 GRM3Q14832 879 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 PRKD1Q15139 912 aaPredicted RBP19.45■□□□□ 0.7
HOXA9-202ENST00000396345 NOMO1Q15155 1222 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 GDPD4Q6W3E5 623 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.45■□□□□ 0.7
HOXA9-202ENST00000396345 PRR23BQ6ZRT6 265 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 PGBD5Q8N414 524 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 ARRDC3Q96B67 414 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 MGME1Q9BQP7 344 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 OSBPL1AQ9BXW6 950 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 NEUROG2Q9H2A3 272 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 HAUS2Q9NVX0 235 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 AMACRQ9UHK6 382 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 FZD4Q9ULV1 537 aa19.45■□□□□ 0.7
HOXA9-202ENST00000396345 H7C0C1 242 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 NDUFS2O75306 463 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 DRD3P35462 400 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 MAPK8P45983 427 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 ATP5OP48047 213 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 MAXP61244 160 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 RPL6Q02878 288 aaKnown RBP19.44■□□□□ 0.7
HOXA9-202ENST00000396345 ITKQ08881 620 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 CCDC15Q0P6D6 951 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 KLF1Q13351 362 aaPredicted RBP19.44■□□□□ 0.7
HOXA9-202ENST00000396345 TTC13Q8NBP0 860 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 VOPP1Q96AW1 172 aa19.44■□□□□ 0.7
HOXA9-202ENST00000396345 ZNF419Q96HQ0 510 aaPredicted RBP19.44■□□□□ 0.7
HOXA9-202ENST00000396345 KLHL32Q96NJ5 620 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms