RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 NAB1Q13506 487 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 GRM2Q14416 872 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 C5orf22Q49AR2 442 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 TIGD7Q6NT04 549 aaPredicted RBP15.35■□□□□ 0.05
SCAF11-204ENST00000395454 Q6ZNB5 142 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 MARK2Q7KZI7 788 aaKnown RBP15.35■□□□□ 0.05
SCAF11-204ENST00000395454 PIGWQ7Z7B1 504 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ATPAF2Q8N5M1 289 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 BANPQ8N9N5 519 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 DEPDC1BQ8WUY9 529 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ZNF419Q96HQ0 510 aaPredicted RBP15.35■□□□□ 0.05
SCAF11-204ENST00000395454 CELF6Q96J87 481 aaKnown RBP15.35■□□□□ 0.05
SCAF11-204ENST00000395454 MAGEB18Q96M61 343 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 PPP1R2P1Q96PQ5 205 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 PLA2G2FQ9BZM2 168 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 SLC39A8Q9C0K1 460 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 RABEP2Q9H5N1 569 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 RSPH14Q9UHP6 348 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ZNF510Q9Y2H8 683 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 WNT6Q9Y6F9 365 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 MYO10Q9HD67 2058 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 DRGXA6NNA5 263 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 AP3B1O00203 1094 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 PSMD3O43242 534 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ECI2O75521 394 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ZWINTO95229 277 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 PSMC3P17980 439 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 KRT4P19013 534 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 NFKB1P19838 968 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 NIPAL4Q0D2K0 466 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 HTR4Q13639 388 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ADGRF1Q5T601 910 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 RAP1GAP2Q684P5 730 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 TRMT10BQ6PF06 316 aaKnown RBP15.35■□□□□ 0.05
SCAF11-204ENST00000395454 C6orf89Q6UWU4 347 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 MFSD6LQ8IWD5 586 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 YAF2Q8IY57 180 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ZFYVE19Q96K21 471 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 ZYG11BQ9C0D3 744 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 RETREG1Q9H6L5 497 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 LRRC40Q9H9A6 602 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 NDFIP2Q9NV92 336 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 MKS1Q9NXB0 559 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 MAD1L1Q9Y6D9 718 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 IKBKGQ9Y6K9 419 aa15.35■□□□□ 0.05
SCAF11-204ENST00000395454 GOLGA6L7A0A1B0GV03 622 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 ARHGAP42A6NI28 874 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 CXorf49A8MYA2 514 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-204ENST00000395454 TM9SF1O15321 606 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 PIAS1O75925 651 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 PEX11BO96011 259 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 CCNB1P14635 433 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 PPARDQ03181 441 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 CRYMQ14894 314 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 LRRC14Q15048 493 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 FAM133BQ5BKY9 247 aaKnown RBP15.34■□□□□ 0.05
SCAF11-204ENST00000395454 TTC39BQ5VTQ0 682 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-204ENST00000395454 TRIM68Q6AZZ1 485 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 NADSYN1Q6IA69 706 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 RFWD3Q6PCD5 774 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 ARHGAP36Q6ZRI8 547 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 YTHDF3Q7Z739 585 aaKnown RBP15.34■□□□□ 0.05
SCAF11-204ENST00000395454 CHSY1Q86X52 802 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 AZIN2Q96A70 460 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 MTBPQ96DY7 904 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 FCRL5Q96RD9 977 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 LINC00597Q9H2U6 94 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 KCNK12Q9HB15 430 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 THG1LQ9NWX6 298 aaKnown RBP15.34■□□□□ 0.05
SCAF11-204ENST00000395454 DUS2Q9NX74 493 aaKnown RBP15.34■□□□□ 0.05
SCAF11-204ENST00000395454 TBC1D14Q9P2M4 693 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 VANGL2Q9ULK5 521 aa15.34■□□□□ 0.05
SCAF11-204ENST00000395454 ANHXE9PGG2 379 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 LATS1O95835 1130 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 JCHAINP01591 159 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 CNTFP26441 200 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 MGAT1P26572 445 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 SLC6A4P31645 630 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 SERPINB9P50453 376 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 GKAP1Q5VSY0 366 aaPredicted RBP15.33■□□□□ 0.05
SCAF11-204ENST00000395454 ARMC3Q5W041 872 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 TMEM135Q86UB9 458 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 CCDC117Q8IWD4 279 aaPredicted RBP15.33■□□□□ 0.05
SCAF11-204ENST00000395454 LRRC34Q8IZ02 419 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 C4orf33Q8N1A6 199 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 ANKRD42Q8N9B4 389 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 OSCP1Q8WVF1 389 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 BHMTQ93088 406 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 AGAP3Q96P47 875 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 TRIM56Q9BRZ2 755 aaKnown RBP15.33■□□□□ 0.05
SCAF11-204ENST00000395454 SYBUQ9NX95 663 aa15.33■□□□□ 0.05
SCAF11-204ENST00000395454 MYOFQ9NZM1 2061 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 TCF20Q9UGU0 1960 aaKnown RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 F5H5T6 163 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 DFFAO00273 331 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 SLC9A3R1O14745 358 aaPredicted RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 KRT37O76014 449 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 ASGR2P07307 311 aa15.33■□□□□ 0.04
SCAF11-204ENST00000395454 SNRPAP09012 282 aaKnown RBP15.33■□□□□ 0.04
SCAF11-204ENST00000395454 TACR2P21452 398 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms