RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 CHD7Q9P2D1 2997 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 FAM237BA0A1B0GVD1 139 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 E2F8A0AVK6 867 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 TMEM120BA0PK00 339 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 MUSKO15146 869 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 USP1O94782 785 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ALDH1A2O94788 518 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 MMP2P08253 660 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ERVK-10P10266 1014 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 CEBPBP17676 345 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 CHRNA4P43681 627 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 SCNN1BP51168 640 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 TNK2Q07912 1038 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 RFTN1Q14699 578 aaPredicted RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 CBX2Q14781 532 aaPredicted RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 ANKRD20A4Q4UJ75 823 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 PCID2Q5JVF3 399 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 PRSS36Q5K4E3 855 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 LGSNQ5TDP6 509 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 DENND5AQ6IQ26 1287 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 TAX1BP1Q86VP1 789 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 RNF135Q8IUD6 432 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 FAM217AQ8IXS0 508 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.76□□□□□ -1.01
TDP1-203ENST00000393454 ARRDC2Q8TBH0 407 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 WFDC5Q8TCV5 224 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 TTC17Q96AE7 1141 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ZNF707Q96C28 371 aaPredicted RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 MFSD3Q96ES6 412 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 EXOC2Q96KP1 924 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ZSWIM3Q96MP5 696 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 KIF9Q9HAQ2 790 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 INTS9Q9NV88 658 aaKnown RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 NKIRAS1Q9NYS0 192 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.76□□□□□ -1.01
TDP1-203ENST00000393454 SENP1Q9P0U3 644 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ZFATQ9P243 1243 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 SOX13Q9UN79 622 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 ACTL7BQ9Y614 415 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 FAM169AQ9Y6X4 670 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 NOTCH4Q99466 2003 aa8.76□□□□□ -1.01
TDP1-203ENST00000393454 GOLGA8RI6L899 631 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 RFXAPO00287 272 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 GFRA2O00451 464 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 KRT37O76014 449 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 C1QAP02745 245 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 SERPINF2P08697 491 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 NMBRP28336 390 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 ARF5P84085 180 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 MGAT5Q09328 741 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 CYTH1Q15438 398 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 PKN3Q6P5Z2 889 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 RANBP10Q6VN20 620 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 CYS1Q717R9 158 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 ITFG1Q8TB96 612 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 DYDC1Q8WWB3 177 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 CERS2Q96G23 380 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 PSKH2Q96QS6 385 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 KLF6Q99612 283 aaPredicted RBP8.75□□□□□ -1.01
TDP1-203ENST00000393454 APOL5Q9BWW9 433 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 LMAN2LQ9H0V9 348 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 RABEP2Q9H5N1 569 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 MLXIPLQ9NP71 852 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 C20orf96Q9NUD7 363 aaPredicted RBP8.75□□□□□ -1.01
TDP1-203ENST00000393454 TXNDC16Q9P2K2 825 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 SLC17A6Q9P2U8 582 aa8.75□□□□□ -1.01
TDP1-203ENST00000393454 EPOPA6NHQ4 379 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 SOBPA7XYQ1 873 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 TRIM49D1C9J1S8 452 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 SHOX2O60902 331 aaPredicted RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 KRT38O76015 456 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 TMCC1O94876 653 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 PRAMEF12O95522 483 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 SNRPAP09012 282 aaKnown RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 KRT4P19013 534 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 LSP1P33241 339 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 SERPINH1P50454 418 aaKnown RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 CDK18Q07002 472 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 LMAN2Q12907 356 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 BMPR2Q13873 1038 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 IHHQ14623 411 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 LRRC14Q15048 493 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 DUSP6Q16828 381 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 SIRPB2Q5JXA9 342 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 MPP7Q5T2T1 576 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 COL13A1Q5TAT6 717 aaPredicted RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 POTEHQ6S545 545 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 ZNF771Q7L3S4 317 aaPredicted RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 TMEM135Q86UB9 458 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 ARID3BQ8IVW6 561 aaPredicted RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 APCDD1Q8J025 514 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 PAIP2Q9BPZ3 127 aaKnown RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 MGME1Q9BQP7 344 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 C2orf49Q9BVC5 232 aaPredicted RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 KIFC1Q9BW19 673 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 NOD2Q9HC29 1040 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 KIAA1522Q9P206 1035 aaPredicted RBP8.74□□□□□ -1.01
TDP1-203ENST00000393454 VPS51Q9UID3 782 aa8.74□□□□□ -1.01
TDP1-203ENST00000393454 ZNF180Q9UJW8 692 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms