RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ACSS2Q9NR19 701 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 RBM22Q9NW64 420 aaKnown RBP eCLIP12.47□□□□□ -0.411e-8■■■■■ 30.2
RFC5-201ENST00000392542 XPR1Q9UBH6 696 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 VTI1BQ9UEU0 232 aa12.47□□□□□ -0.41
RFC5-201ENST00000392542 NEMP1O14524 444 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 TNFRSF10BO14763 440 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 DLX3O60479 287 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 THRAP10827 490 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 STMN1P16949 149 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 PAMP19021 973 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 SLC1A2P43004 574 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 DSC3Q14574 896 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 ZNF460Q14592 562 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 LSM12Q3MHD2 195 aaKnown RBP12.46□□□□□ -0.41
RFC5-201ENST00000392542 AFMIDQ63HM1 303 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 KIAA0930Q6ICG6 404 aaPredicted RBP12.46□□□□□ -0.41
RFC5-201ENST00000392542 ACAD11Q709F0 780 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 SCD5Q86SK9 330 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 HPS6Q86YV9 775 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 CEP97Q8IW35 865 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 MFSD6LQ8IWD5 586 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 LSMEM2Q8N112 164 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 CCDC124Q96CT7 223 aaKnown RBP12.46□□□□□ -0.41
RFC5-201ENST00000392542 UROC1Q96N76 676 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 GPR78Q96P69 363 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 NR1H4Q96RI1 486 aaPredicted RBP12.46□□□□□ -0.41
RFC5-201ENST00000392542 TREX1Q9NSU2 369 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 SLC2A6Q9UGQ3 507 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 ZDHHC2Q9UIJ5 367 aa12.46□□□□□ -0.41
RFC5-201ENST00000392542 A0A0U1RQF3 1178 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 TNPO2O14787 897 aaKnown RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 SLC22A2O15244 555 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 PMPCBO75439 489 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 UPP2O95045 317 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 RPLP2P05387 115 aaKnown RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 TFEBP19484 476 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 EPHA3P29320 983 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 SERPINB5P36952 375 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 CD151P48509 253 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 PGFP49763 221 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 NSUN2Q08J23 767 aaKnown RBP eCLIP12.46□□□□□ -0.42
RFC5-201ENST00000392542 ASPHQ12797 758 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 CNGA3Q16281 694 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 RNF111Q6ZNA4 994 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 SETD3Q86TU7 594 aaPredicted RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 SPATA2LQ8IUW3 424 aaPredicted RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 CPSF7Q8N684 471 aaKnown RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 RTL3Q8N8U3 475 aaKnown RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 C2CD4AQ8NCU7 369 aaPredicted RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 PDCD6IPQ8WUM4 868 aaKnown RBP12.46□□□□□ -0.42
RFC5-201ENST00000392542 NXNL1Q96CM4 212 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 SUSD3Q96L08 255 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 MRGPRX2Q96LB1 330 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 CCDC28BQ9BUN5 200 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 FSD1LQ9BXM9 530 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 ZNF385DQ9H6B1 395 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 TBC1D13Q9NVG8 400 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 CDYLQ9Y232 598 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 INPP5FQ9Y2H2 1132 aa12.46□□□□□ -0.42
RFC5-201ENST00000392542 ARHGEF37A1IGU5 675 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 RGSL1A5PLK6 1076 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 E9PAM4 449 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 TYMPP19971 482 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 GRIK1P39086 918 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 THPOP40225 353 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 PAPOLAP51003 745 aaKnown RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 NRG1Q02297 640 aaPredicted RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 DLG1Q12959 904 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 TCHHL1Q5QJ38 904 aaPredicted RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 RANBP10Q6VN20 620 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 C14orf80Q86SX3 495 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 EFCAB3Q8N7B9 438 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 ELMO2Q96JJ3 720 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 PPP1R36Q96LQ0 422 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 NUF2Q9BZD4 464 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 PRKD2Q9BZL6 878 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 NMUR1Q9HB89 426 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 PRPF19Q9UMS4 504 aaKnown RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 HS3ST4Q9Y661 456 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 A0A087X1B8 175 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 MANSC4A6NHS7 340 aaPredicted RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 WASH4PA8MWX3 477 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 KCNU1A8MYU2 1149 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 MOCS2O96007 188 aaPredicted RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 ITGB1P05556 798 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 YY1P25490 414 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 ADSLP30566 484 aaPredicted RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 HUNKP57058 714 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 TAS2R39P59534 338 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 HNRNPDQ14103 355 aaKnown RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 TSTD2Q5T7W7 516 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 OR52E8Q6IFG1 317 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 C16orf89Q6UX73 402 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 SNX32Q86XE0 403 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 RASAL3Q86YV0 1011 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
RFC5-201ENST00000392542 RP9Q8TA86 221 aaKnown RBP12.45□□□□□ -0.42
RFC5-201ENST00000392542 UPF3AQ9H1J1 476 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms