RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PTGER3P43115 390 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 HCAR3P49019 387 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 GEMIN4P57678 1058 aaKnown RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 TAS2R40P59535 323 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 SH3BP2P78314 561 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 ZNF33AQ06730 810 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 DPYSL2Q16555 572 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 POM121L1PQ3SYA9 428 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 PARP15Q460N3 678 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 C4orf48Q5BLP8 95 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 LYSMD4Q5XG99 296 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 C22orf39Q6P5X5 142 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 BPHLQ86WA6 291 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 UMODL1-AS1Q8N2C9 162 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 RYBPQ8N488 228 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 HDDC3Q8N4P3 179 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 NETO2Q8NC67 525 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 CHST14Q8NCH0 376 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 HSPA12BQ96MM6 686 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 BAG1Q99933 345 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 OMDQ99983 421 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 TM6SF2Q9BZW4 377 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 CEP44Q9C0F1 390 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 KLC2Q9H0B6 622 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 BTBD1Q9H0C5 482 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 SMOC1Q9H4F8 434 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 NOL6Q9H6R4 1146 aaKnown RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 PCDH18Q9HCL0 1135 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 KLHL11Q9NVR0 708 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 FBXL12Q9NXK8 326 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 DONSONQ9NYP3 566 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 WSB2Q9NYS7 404 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 ZMIZ1Q9ULJ6 1067 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 SCML1Q9UN30 329 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 TFR2Q9UP52 801 aa9.41□□□□□ -0.9
HMGN1-202ENST00000380747 EPN1Q9Y6I3 576 aaPredicted RBP9.41□□□□□ -0.9
HMGN1-202ENST00000380747 BCLAF3A2AJT9 711 aaKnown RBP9.4□□□□□ -0.9
HMGN1-202ENST00000380747 ZSCAN5CA6NGD5 496 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-202ENST00000380747 FAM47DPA6NHR8 397 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 ARHGAP42A6NI28 874 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 MEI4A8MW99 385 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 C1QTNF9BB2RNN3 333 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 DFFAO00273 331 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 PLK4O00444 970 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 MCF2LO15068 1137 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 ALOX15BO15296 676 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 MTA2O94776 668 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 NDUFA10O95299 355 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 LCA5LO95447 670 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 CD160O95971 181 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 IGLV3-19P01714 112 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 KRT7P08729 469 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 C1QTNF9P0C862 333 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 TNNT1P13805 278 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 C5AR1P21730 350 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 ITPKAP23677 461 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 CHRNA3P32297 505 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 ACSL1P33121 698 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 MAN1A1P33908 653 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 ARHGAP25P42331 645 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 PAPOLAP51003 745 aaKnown RBP9.4□□□□□ -0.9
HMGN1-202ENST00000380747 NDST2P52849 883 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 SERINC3Q13530 473 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 DPYSQ14117 519 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 ATP13A4Q4VNC1 1196 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 CARD16Q5EG05 197 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 FAM46CQ5VWP2 391 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 PSAPL1Q6NUJ1 521 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 TMCO3Q6UWJ1 677 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 RAD9BQ6WBX8 426 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-202ENST00000380747 POLNQ7Z5Q5 900 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 SLC41A1Q8IVJ1 513 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 RGL4Q8IZJ4 473 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 PCDH20Q8N6Y1 951 aaKnown RBP9.4□□□□□ -0.9
HMGN1-202ENST00000380747 KCTD6Q8NC69 237 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 OR2A12Q8NGT7 310 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 PIP4K2CQ8TBX8 421 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 CSPG4P5Q96PW8 444 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 CALN1Q9BXU9 219 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 SLC39A8Q9C0K1 460 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 NEUROG2Q9H2A3 272 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 LRRC19Q9H756 370 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 SGK2Q9HBY8 427 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 UBA2Q9UBT2 640 aaPredicted RBP9.4□□□□□ -0.9
HMGN1-202ENST00000380747 SERGEFQ9UGK8 458 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 MFHAS1Q9Y4C4 1052 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 HYOU1Q9Y4L1 999 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 IGSF10Q6WRI0 2623 aa9.4□□□□□ -0.9
HMGN1-202ENST00000380747 MYO18AQ92614 2054 aaKnown RBP9.4□□□□□ -0.91
HMGN1-202ENST00000380747 EML5Q05BV3 1969 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
HMGN1-202ENST00000380747 J3KR12 359 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 KPNA3O00505 521 aaPredicted RBP9.39□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF821O75541 412 aaPredicted RBP9.39□□□□□ -0.91
HMGN1-202ENST00000380747 TMCC1O94876 653 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 FSBPO95073 299 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 SEMA4FO95754 770 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 PRNPP04156 253 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms