RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CST5P28325 142 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 DLG4P78352 724 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 IFI35P80217 286 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 DLG2Q15700 870 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 LRRC36Q1X8D7 754 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 SGO1Q5FBB7 561 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 HHATQ5VTY9 493 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 C12orf29Q8N999 325 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ATG4AQ8WYN0 398 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 COL26A1Q96A83 441 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 KCNS3Q9BQ31 491 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 NIFKQ9BYG3 293 aaKnown RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 TRIM45Q9H8W5 580 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 CNOT10Q9H9A5 744 aaKnown RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 PISDQ9UG56 409 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 CACNA1EQ15878 2313 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 SUPT3HB4E1H0 165 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ERN1O75460 977 aaKnown RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 PRKAR1AP10644 381 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 OXTRP30559 389 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 GUCA1AP43080 201 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 EIF3EP60228 445 aaKnown RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 CYP2A13Q16696 494 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 BOLA3Q53S33 107 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 SPDYAQ5MJ70 313 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ANKRD20A2Q5SQ80 823 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ANKRD20A1Q5TYW2 823 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ANKRD20A3Q5VUR7 823 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ANKRD33Q7Z3H0 272 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 KBTBD6Q86V97 674 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ARHGEF19Q8IW93 802 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 DNAJC5GQ8N7S2 189 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ETNPPLQ8TBG4 499 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 BRD8Q9H0E9 1235 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 CDH19Q9H159 772 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ERVK-5Q9HDB9 667 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 OLFML3Q9NRN5 406 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 EVLQ9UI08 416 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 MAFBQ9Y5Q3 323 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 UBR2Q8IWV8 1755 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 A6NL46 340 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 LEFTY2O00292 366 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 TGFB1I1O43294 461 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 CDK14O94921 469 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 LDOC1O95751 146 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 SNHG28P0DPA3 235 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 HNF4AP41235 474 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 RPS15P62841 145 aaKnown RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 PLGLB1Q02325 96 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 LRRC73Q5JTD7 316 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 ADHFE1Q8IWW8 467 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 RHOT1Q8IXI2 618 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 SRRM1Q8IYB3 904 aaKnown RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 DSELQ8IZU8 1212 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 SLC39A11Q8N1S5 342 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 EID2Q8N6I1 236 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 BEND7Q8N7W2 519 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-202ENST00000379446 MED8Q96G25 268 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 HEPHQ9BQS7 1158 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 TBX21Q9UL17 535 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 NCANO14594 1321 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 COL4A1P02462 1669 aa6.63□□□□□ -1.35
NEDD9-202ENST00000379446 C1orf232A0A0U1RR37 186 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 C4orf47A7E2U8 309 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 ANXA9O76027 345 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 TNFP01375 233 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 APRTP07741 180 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 PECAM1P16284 738 aaPredicted RBP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 TNFRSF8P28908 595 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 GNPDA1P46926 289 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 MTM1Q13496 603 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 MANEAQ5SRI9 462 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 AGBL2Q5U5Z8 902 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 METTL3Q86U44 580 aaKnown RBP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 HIPK4Q8NE63 616 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 ALG3Q92685 438 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 HES6Q96HZ4 224 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 C16orf70Q9BSU1 422 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 MAF1Q9H063 256 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 WDR6Q9NNW5 1121 aaKnown RBP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 ASF1AQ9Y294 204 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 A0A1W2PP55 124 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 FAM187AA6NFU0 413 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 MIF4GDA9UHW6 222 aaKnown RBP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 SLC26A4O43511 780 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 EDIL3O43854 480 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 PHF2O75151 1096 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 CRTAMO95727 393 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 TBX18O95935 607 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 HNRNPCP07910 306 aaKnown RBP eCLIP6.62□□□□□ -1.351e-6■■■■□ 21.3
NEDD9-202ENST00000379446 NQO1P15559 274 aaKnown RBP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 CYP2A7P20853 494 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 RPL21P46778 160 aaKnown RBP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 CLK2P49760 499 aaKnown RBP6.62□□□□□ -1.35
NEDD9-202ENST00000379446 ZNF33AQ06730 810 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 MAPK7Q13164 816 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 GPR17Q13304 367 aa6.62□□□□□ -1.35
NEDD9-202ENST00000379446 RNF19BQ6ZMZ0 732 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms