RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 RTP4Q96DX8 246 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 LRIG1Q96JA1 1093 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 EXOC2Q96KP1 924 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 NUDCD1Q96RS6 583 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 HEPHQ9BQS7 1158 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
TIMP1-202ENST00000377017 CEP41Q9BYV8 373 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 SCUBE2Q9NQ36 999 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 ATP8A1Q9Y2Q0 1164 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 BDP1A6H8Y1 2624 aa13.36□□□□□ -0.27
TIMP1-202ENST00000377017 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
TIMP1-202ENST00000377017 GOLGA6CA6NDK9 693 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 GOLGA6BA6NDN3 693 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ANTXRLA6NF34 631 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 C1QTNF3-AMACRE9PGA6 284 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ZNF821O75541 412 aaPredicted RBP13.35□□□□□ -0.27
TIMP1-202ENST00000377017 GCATO75600 419 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ECEL1O95672 775 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 PRNPP04156 253 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 GOLGA6DP0CG33 693 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 KCNJ1P48048 391 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 CCR3P51677 355 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 MAXP61244 160 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 CRY1Q16526 586 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 MYLK3Q32MK0 819 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ANKRD20A2Q5SQ80 823 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ATXN7L2Q5T6C5 722 aaPredicted RBP13.35□□□□□ -0.27
TIMP1-202ENST00000377017 C9orf64Q5T6V5 341 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ANKRD20A1Q5TYW2 823 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ANKRD20A3Q5VUR7 823 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ZNF776Q68DI1 518 aaPredicted RBP13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ALG1LQ6GMV1 187 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 DPY19L3Q6ZPD9 716 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 SRLQ86TD4 932 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 KLHL7Q8IXQ5 586 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 FBXL6Q8N531 539 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 CEP112Q8N8E3 955 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 CCHCR1Q8TD31 782 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 LRRC45Q96CN5 670 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 SEMA3CQ99985 751 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 OSBPL1AQ9BXW6 950 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 DDX47Q9H0S4 455 aaKnown RBP13.35□□□□□ -0.27
TIMP1-202ENST00000377017 SLC25A51Q9H1U9 297 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ZDHHC6Q9H6R6 413 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 ATP13A3Q9H7F0 1226 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 GLOD4Q9HC38 313 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 PRSS16Q9NQE7 514 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 GOLGA6AQ9NYA3 693 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 PAK5Q9P286 719 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 IL36AQ9UHA7 158 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 RSPH14Q9UHP6 348 aa13.35□□□□□ -0.27
TIMP1-202ENST00000377017 A0A1W2PQF6 199 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 TCRBV21S2A2A0A5A6 115 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CTAGE15A4D2H0 777 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 MUSKO15146 869 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 INSIG1O15503 277 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 SERPINF2P08697 491 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CTAGE8P0CG41 777 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CR2P20023 1033 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 SERPINA4P29622 427 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 TNNT3P45378 269 aaPredicted RBP13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CXCL12P48061 93 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 GDF10P55107 478 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 SFSWAPQ12872 951 aaKnown RBP13.34□□□□□ -0.27
TIMP1-202ENST00000377017 MTAPQ13126 283 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 DHX34Q14147 1143 aaKnown RBP13.34□□□□□ -0.27
TIMP1-202ENST00000377017 GAS6Q14393 721 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 PPP1R7Q15435 360 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 SLC14A2Q15849 920 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CFAP58Q5T655 872 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 FAM46CQ5VWP2 391 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 TTC27Q6P3X3 843 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 SYDE1Q6ZW31 735 aaPredicted RBP13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CTAGE6Q86UF2 777 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CTAGE4Q8IX94 777 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 STK40Q8N2I9 435 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 PAF1Q8N7H5 531 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CNTD1Q8N815 330 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 TMIEQ8NEW7 156 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 TSTD1Q8NFU3 115 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CCDC110Q8TBZ0 833 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 PPP1R16AQ96I34 528 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 CPEB1Q9BZB8 566 aaKnown RBP13.34□□□□□ -0.27
TIMP1-202ENST00000377017 GBA3Q9H227 469 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 MTG2Q9H4K7 406 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 EPHX3Q9H6B9 360 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 PCDH9Q9HC56 1237 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 DYRK4Q9NR20 520 aa13.34□□□□□ -0.27
TIMP1-202ENST00000377017 SPATA6Q9NWH7 488 aaPredicted RBP13.34□□□□□ -0.27
TIMP1-202ENST00000377017 DLGAP2Q9P1A6 1054 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms