RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 STRADAQ7RTN6 431 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 CLK4Q9HAZ1 481 aaKnown RBP11.66□□□□□ -0.54
PTCH1-203ENST00000375274 PLGRKTQ9HBL7 147 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 H7C4K7 107 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 RPLP2P05387 115 aaKnown RBP11.66□□□□□ -0.54
PTCH1-203ENST00000375274 NELFEP18615 380 aaKnown RBP11.66□□□□□ -0.54
PTCH1-203ENST00000375274 MPSTP25325 297 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 TM4SF1P30408 202 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 CD86P42081 329 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 CDH13P55290 713 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 BROXQ5VW32 411 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 PTF1AQ7RTS3 328 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 LRRC52Q8N7C0 313 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 BANPQ8N9N5 519 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 FAM47BQ8NA70 645 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 FAM45AQ8TCE6 357 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 TADA1Q96BN2 335 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 LENG1Q96BZ8 264 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-203ENST00000375274 NPAS2Q99743 824 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 MTG1Q9BT17 334 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-203ENST00000375274 PCDHGC3Q9UN70 934 aa11.66□□□□□ -0.54
PTCH1-203ENST00000375274 IGKV6D-41A0A0C4DH26 115 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 BCLAF3A2AJT9 711 aaKnown RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 MAP3K13O43283 966 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 RGS14O43566 566 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 EGFRP00533 1210 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 YWHAQP27348 245 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 BNIP2Q12982 314 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 SPANXN2Q5MJ10 180 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 CLYBLQ8N0X4 340 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 TMEM132CQ8N3T6 1108 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 NKAPQ8N5F7 415 aaKnown RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 OR52K2Q8NGK3 314 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 FAM81AQ8TBF8 368 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 OPTCQ9UBM4 332 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 EGFL7Q9UHF1 273 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 C3orf18Q9UK00 162 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 CAB39Q9Y376 341 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 TNPO3Q9Y5L0 923 aaKnown RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 NRP2O60462 931 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 ARF4P18085 180 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 CERCAMQ5T4B2 595 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 SPESP1Q6UW49 350 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 MON2Q7Z3U7 1717 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 CD3EAPO15446 510 aaKnown RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 ADCY6O43306 1168 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 PLIN3O60664 434 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 CILPO75339 1184 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 IMPDH2P12268 514 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 MRPS5P82675 430 aaKnown RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 FSTL1Q12841 308 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 DGKZQ13574 1117 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 RGS21Q2M5E4 152 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 ACSBG2Q5FVE4 666 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 TMC5Q6UXY8 1006 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 OR7A2PQ8NGA2 310 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 SLCO2A1Q92959 643 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 UBA2Q9UBT2 640 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 DUSP12Q9UNI6 340 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 DMTF1Q9Y222 760 aa11.65□□□□□ -0.54
PTCH1-203ENST00000375274 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-203ENST00000375274 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 EFCAB14O75071 495 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 SLC16A1P53985 500 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF284Q2VY69 593 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 VWA5B1Q5TIE3 1220 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 MRPS31Q92665 395 aaKnown RBP11.65□□□□□ -0.55
PTCH1-203ENST00000375274 ABHD8Q96I13 439 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 TRMOQ9BU70 441 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 SELENONQ9NZV5 590 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF112Q9UJU3 913 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 GNEQ9Y223 722 aaKnown RBP11.65□□□□□ -0.55
PTCH1-203ENST00000375274 WASF2Q9Y6W5 498 aa11.65□□□□□ -0.55
PTCH1-203ENST00000375274 ADSSP30520 456 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 RAB27AP51159 221 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 TRIM25Q14258 630 aaKnown RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 MFSD10Q14728 455 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 SLC25A52Q3SY17 297 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 STXBP5Q5T5C0 1151 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 GPR107Q5VW38 600 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 RSBN1Q5VWQ0 802 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ZNF621Q6ZSS3 439 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 RNF180Q86T96 592 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ZBTB46Q86UZ6 589 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 DSELQ8IZU8 1212 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 LGI2Q8N0V4 545 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 DAW1Q8N136 415 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 BPIFB6Q8NFQ5 453 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 EMILIN2Q9BXX0 1053 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 NOL6Q9H6R4 1146 aaKnown RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 VPS45Q9NRW7 570 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 KLQ9UEF7 1012 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 STK39Q9UEW8 545 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 KLHL3Q9UH77 587 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms