RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TBX4P57082 545 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 RAP1GAP2Q684P5 730 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 CXorf57Q6NSI4 855 aaKnown RBP12.5□□□□□ -0.41
HDAC8-204ENST00000373560 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-204ENST00000373560 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
HDAC8-204ENST00000373560 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 GRIN3AQ8TCU5 1115 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 PARD3BQ8TEW8 1205 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 STARD8Q92502 1023 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 ALG14Q96F25 216 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 GPR34Q9UPC5 381 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 PCDHGA3Q9Y5H0 932 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 CHD5Q8TDI0 1954 aa12.5□□□□□ -0.41
HDAC8-204ENST00000373560 ANKRD36A6QL64 1941 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 IGLON5A6NGN9 336 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 CFAP99D6REC4 459 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 K7ERQ8 282 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 PIK3R2O00459 728 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 SPTLC2O15270 562 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 DNAJB5O75953 348 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 MT-CO1P00395 513 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 HLA-DRAP01903 254 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 P4HA1P13674 534 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 F8A1P23610 371 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 CHRNA3P32297 505 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 NNMTP40261 264 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 HMGN5P82970 282 aaKnown RBP12.49□□□□□ -0.41
HDAC8-204ENST00000373560 SEPT6Q14141 434 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 ZACNQ401N2 412 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 MAP9Q49MG5 647 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 C1orf220Q5T0J3 134 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 FAXCQ5TGI0 409 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 TMEM164Q5U3C3 297 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 ERN2Q76MJ5 926 aaKnown RBP12.49□□□□□ -0.41
HDAC8-204ENST00000373560 SV2BQ7L1I2 683 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 MCEMP1Q8IX19 187 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 GPR156Q8NFN8 814 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 FAM174AQ8TBP5 190 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 CLEC4CQ8WTT0 213 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 ERCC4Q92889 916 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-204ENST00000373560 CCDC74BQ96LY2 380 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 TBATAQ96M53 351 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 PCMTD1Q96MG8 357 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-204ENST00000373560 TAAR9Q96RI9 348 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 IRX2Q9BZI1 471 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-204ENST00000373560 SLC13A1Q9BZW2 595 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 B3GNT4Q9C0J1 378 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 TLK1Q9UKI8 766 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 FADS3Q9Y5Q0 445 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 PRRC2CQ9Y520 2896 aaKnown RBP12.49□□□□□ -0.41
HDAC8-204ENST00000373560 CCDC168Q8NDH2 2452 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 SVILO95425 2214 aa12.49□□□□□ -0.41
HDAC8-204ENST00000373560 SPG11Q96JI7 2443 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 TYW5A2RUC4 315 aaKnown RBP12.48□□□□□ -0.41
HDAC8-204ENST00000373560 FPGTO14772 594 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 HNRNPRO43390 633 aaKnown RBP12.48□□□□□ -0.41
HDAC8-204ENST00000373560 RECQLP46063 649 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-204ENST00000373560 DAOAP59103 153 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 ANAPC15P60006 121 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 CLDN10P78369 228 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 SGSM1Q2NKQ1 1148 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 TUSC1Q2TAM9 212 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 GOLGA7BQ2TAP0 167 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 CERCAMQ5T4B2 595 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 CENPQQ7L2Z9 268 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-204ENST00000373560 SH2D3CQ8N5H7 860 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 OR2A12Q8NGT7 310 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 TSACCQ96A04 125 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-204ENST00000373560 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 PILRAQ9UKJ1 303 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 DOLKQ9UPQ8 538 aa12.48□□□□□ -0.41
HDAC8-204ENST00000373560 IGHV5-10-1A0A0J9YXX1 117 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 MKRN2OSH3BPM6 223 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 SMAD6O43541 496 aaKnown RBP12.47□□□□□ -0.41
HDAC8-204ENST00000373560 SRCP12931 536 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 ADRB3P13945 408 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 TACR2P21452 398 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 PIK3CAP42336 1068 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 ABL2P42684 1182 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 RPS21P63220 83 aaKnown RBP12.47□□□□□ -0.41
HDAC8-204ENST00000373560 CENPCQ03188 943 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 NAA30Q147X3 362 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-204ENST00000373560 INPP5JQ15735 1006 aaPredicted RBP12.47□□□□□ -0.41
HDAC8-204ENST00000373560 ALG11Q2TAA5 492 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 RRAGBQ5VZM2 374 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 ANKS6Q68DC2 871 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 KIAA1161Q6NSJ0 714 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 MACC1Q6ZN28 852 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 PARS2Q7L3T8 475 aaKnown RBP12.47□□□□□ -0.41
HDAC8-204ENST00000373560 CHSY1Q86X52 802 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 UNC45BQ8IWX7 931 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 CCAR2Q8N163 923 aaKnown RBP12.47□□□□□ -0.41
HDAC8-204ENST00000373560 SLC4A11Q8NBS3 891 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 ZNF507Q8TCN5 953 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 C1QTNF2Q9BXJ5 285 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 TRIM55Q9BYV6 548 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 SPRY4Q9C004 299 aa12.47□□□□□ -0.41
HDAC8-204ENST00000373560 TNKS2Q9H2K2 1166 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms