RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 UPK3BL2E5RIL1 263 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 MTA2O94776 668 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 AMPD1P23109 780 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 GRIA4P48058 902 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 ATXN3P54252 364 aaPredicted RBP20.34■□□□□ 0.85
TMEM53-205ENST00000372244 PPP2CBP62714 309 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 PPP2CAP67775 309 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 FOXK2Q01167 660 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 ATP13A4Q4VNC1 1196 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 MINDY1Q8N5J2 469 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 PPP1R16AQ96I34 528 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 DYRK4Q9NR20 520 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 ETNK2Q9NVF9 386 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 RCOR3Q9P2K3 495 aaPredicted RBP20.34■□□□□ 0.85
TMEM53-205ENST00000372244 NYNRINQ9P2P1 1898 aaKnown RBP20.34■□□□□ 0.85
TMEM53-205ENST00000372244 PCNX2A6NKB5 2137 aa20.34■□□□□ 0.85
TMEM53-205ENST00000372244 A0A1B0GVT2 93 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 LCA5LO95447 670 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 GKP32189 559 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 MAN1A1P33908 653 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 ARHGAP25P42331 645 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 ATXN7L2Q5T6C5 722 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-205ENST00000372244 TP53INP2Q8IXH6 220 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 RHOT2Q8IXI1 618 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 NETO2Q8NC67 525 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 OR2I1PQ8NGU4 316 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 OR6K2Q8NGY2 324 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 CPEB1Q9BZB8 566 aaKnown RBP20.33■□□□□ 0.85
TMEM53-205ENST00000372244 ZDHHC6Q9H6R6 413 aa20.33■□□□□ 0.85
TMEM53-205ENST00000372244 UBA2Q9UBT2 640 aaPredicted RBP20.33■□□□□ 0.85
TMEM53-205ENST00000372244 KRIT1O00522 736 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 WNT9AO14904 365 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 NUDT1P36639 197 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 CDH6P55285 790 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 TAS2R40P59535 323 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 SLC14A1Q13336 389 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 TEAD4Q15561 434 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 KIF19Q2TAC6 998 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 UAP1L1Q3KQV9 507 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 ZNF805Q5CZA5 627 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 IL27RAQ6UWB1 636 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 ARHGAP36Q6ZRI8 547 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 GDAP1L1Q96MZ0 367 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 PANX2Q96RD6 677 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 LHX3Q9UBR4 397 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 ANKRD6Q9Y2G4 727 aa20.32■□□□□ 0.84
TMEM53-205ENST00000372244 A0A1W2PR77 199 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 C16orf96A6NNT2 1141 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 VILLO15195 856 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 OPHN1O60890 802 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 CD48P09326 243 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 ADRB3P13945 408 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 CSRP1P21291 193 aaKnown RBP20.31■□□□□ 0.84
TMEM53-205ENST00000372244 SSR1P43307 286 aaKnown RBP20.31■□□□□ 0.84
TMEM53-205ENST00000372244 NEK3P51956 506 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 RHOAP61586 193 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 IL10RBQ08334 325 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 HLA-BQ31612 363 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 TMCO3Q6UWJ1 677 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 PIP4P1Q86T03 277 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 PRPF39Q86UA1 669 aaKnown RBP20.31■□□□□ 0.84
TMEM53-205ENST00000372244 CCDC170Q8IYT3 715 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 RYBPQ8N488 228 aaPredicted RBP20.31■□□□□ 0.84
TMEM53-205ENST00000372244 RFFLQ8WZ73 363 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 OSBPL1AQ9BXW6 950 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 IPO11Q9UI26 975 aaKnown RBP20.31■□□□□ 0.84
TMEM53-205ENST00000372244 ADAMTS9Q9P2N4 1935 aa20.31■□□□□ 0.84
TMEM53-205ENST00000372244 DFFAO00273 331 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 AP1G1O43747 822 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 WNT1P04628 370 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 KRT7P08729 469 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 CD59P13987 128 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 FECHP22830 423 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 CSNK1DP48730 415 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 RAD51Q06609 339 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 NSUN2Q08J23 767 aaKnown RBP eCLIP20.3■□□□□ 0.84
TMEM53-205ENST00000372244 DPYSL3Q14195 570 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 MESDQ14696 234 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 RFTN1Q14699 578 aaPredicted RBP20.3■□□□□ 0.84
TMEM53-205ENST00000372244 PDK2Q15119 407 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 PPM1JQ5JR12 505 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 FBXL19Q6PCT2 694 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 PARS2Q7L3T8 475 aaKnown RBP20.3■□□□□ 0.84
TMEM53-205ENST00000372244 HORMAD1Q86X24 394 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 SERAC1Q96JX3 654 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 SLC6A18Q96N87 628 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 GAREM1Q9H706 876 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 DMTF1Q9Y222 760 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 FADS3Q9Y5Q0 445 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 A0A1W2PQU0 124 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 RNGTTO60942 597 aaKnown RBP20.3■□□□□ 0.84
TMEM53-205ENST00000372244 PALMO75781 387 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 KCNK5O95279 499 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 IGSF6O95976 241 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 UGT2B4P06133 528 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 ZNF883P0CG24 379 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 CD38P28907 300 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 MAT2AP31153 395 aaKnown RBP20.3■□□□□ 0.84
TMEM53-205ENST00000372244 CTSKP43235 329 aa20.3■□□□□ 0.84
TMEM53-205ENST00000372244 MMRN1Q13201 1228 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms