RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ATP6AP2A0A1C7CYW4 349 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 C9IYK1 514 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 ATP6AP2O75787 350 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 GLP2RO95838 553 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 CHEK2O96017 543 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 DHRS4L1P0CG22 281 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 ANPEPP15144 967 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 DNAJB2P25686 324 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 CXCR3P49682 368 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 GJA9P57773 515 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 RARS2Q5T160 578 aaKnown RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 PAQR9Q6ZVX9 377 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 MON1AQ86VX9 555 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 HPS6Q86YV9 775 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 SLC2A13Q96QE2 648 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 ZNF184Q99676 751 aaPredicted RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 EFHD1Q9BUP0 239 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 CINPQ9BW66 212 aaPredicted RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 SMPD4Q9NXE4 827 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 CCDC167Q9P0B6 97 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 ANKRD6Q9Y2G4 727 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 RAP2CQ9Y3L5 183 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 TBX10O75333 385 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 CABYRO75952 493 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 RAG1P15918 1043 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 HOXD10P28358 340 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 KLF10Q13118 480 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 DPYSQ14117 519 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 PCLAFQ15004 111 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 POTEHQ6S545 545 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 ZNF534Q76KX8 674 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 NET1Q7Z628 596 aaPredicted RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 SETD3Q86TU7 594 aaPredicted RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 FSTL5Q8N475 847 aaPredicted RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 MZB1Q8WU39 189 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 OLFM3Q96PB7 478 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 ZYG11BQ9C0D3 744 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 MMADHCQ9H3L0 296 aaPredicted RBP11.32□□□□□ -0.6
SSU72-202ENST00000359060 ZNF212Q9UDV6 495 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 TRIP11Q15643 1979 aa11.32□□□□□ -0.6
SSU72-202ENST00000359060 NEMP2A6NFY4 417 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 KIF3CO14782 793 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 RPLP2P05387 115 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 SERPINF2P08697 491 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 MYL4P12829 197 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ATP6V1C1P21283 382 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 CCNCP24863 283 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 TAS2R39P59534 338 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 DSC2Q02487 901 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ZRANB3Q5FWF4 1079 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 MBLAC2Q68D91 279 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 OR52K2Q8NGK3 314 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 IRGQQ8WZA9 623 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.31□□□□□ -0.6
SSU72-202ENST00000359060 LENG8Q96PV6 779 aaPredicted RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 TRIM4Q9C037 500 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 SUDS3Q9H7L9 328 aaPredicted RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 UTP6Q9NYH9 597 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 SLC2A6Q9UGQ3 507 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 SLC7A8Q9UHI5 535 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 RPL26L1Q9UNX3 145 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 UTRNP46939 3433 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 SLCO1B7G3V0H7 640 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 RBP1P09455 135 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 FGF3P11487 239 aaPredicted RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 TFEBP19484 476 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 CHRM3P20309 590 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 MRPS22P82650 360 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 GALNT2Q10471 571 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 TAF10Q12962 218 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ALKAL1Q6UXT8 129 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 FRA10AC1Q70Z53 315 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 PCDH20Q8N6Y1 951 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 ZMIZ2Q8NF64 920 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 DDX50Q9BQ39 737 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 KATNBL1Q9H079 304 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 F8W8V4 182 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 MATN3O15232 486 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 SEPT4O43236 478 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 S100BP04271 92 aaPredicted RBP11.31□□□□□ -0.6
SSU72-202ENST00000359060 CCNFP41002 786 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 CCR10P46092 362 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 CDH13P55290 713 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 INHBEP58166 350 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 PRKCZQ05513 592 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 KIAA0319Q5VV43 1072 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 CEP70Q8NHQ1 597 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ARNTL2Q8WYA1 636 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 TUBGCP3Q96CW5 907 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 RCN3Q96D15 328 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 ZNF570Q96NI8 536 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 YY1AP1Q9H869 796 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 AURKCQ9UQB9 309 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 PCDHB12Q9Y5F1 795 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 UBDO15205 165 aa11.31□□□□□ -0.6
SSU72-202ENST00000359060 SRP72O76094 671 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms