RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ENDOD1O94919 500 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 DLDP09622 509 aaKnown RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 HSMCR30P0CW71 290 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 EFTUD2Q15029 972 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■■■■ 28.6
SND1-201ENST00000354725 RNF19BQ6ZMZ0 732 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 CCDC60Q8IWA6 550 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 Q8N9G6 341 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 GAS2L1Q99501 681 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 PDGFCQ9NRA1 345 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 F8W8V4 182 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 SNX4O95219 450 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 ATP5BP06576 529 aaKnown RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 NR3C2P08235 984 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 EIF2AK2P19525 551 aaKnown RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 TPD52P55327 224 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 GAD2Q05329 585 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 PRAMEF19Q5SWL8 479 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 ANKRD22Q5VYY1 191 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 DPP9Q86TI2 863 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 TAMM41Q96BW9 452 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 SERINC2Q96SA4 455 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 CYTH2Q99418 400 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 TMEM134Q9H6X4 195 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 PTBP2Q9UKA9 531 aaKnown RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 RPH3AQ9Y2J0 694 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 F8VP50 259 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 TXNDC9O14530 226 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 CASQ2O14958 399 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 GYG2O15488 501 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 ADAMTS4O75173 837 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 USP1O94782 785 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 CALB1P05937 261 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 NR4A1P22736 598 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 GDF10P55107 478 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 GNG2P59768 71 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 VAC14Q08AM6 782 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 GPS1Q13098 491 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 TRPC3Q13507 836 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 PIGHQ14442 188 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 HSF5Q4G112 596 aaPredicted RBP10.97□□□□□ -0.65
SND1-201ENST00000354725 ALFQ53S48 1182 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 ZBTB41Q5SVQ8 909 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 FAM122CQ6P4D5 195 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 RFX8Q6ZV50 586 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 BBS12Q6ZW61 710 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 CENPUQ71F23 418 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 PPIL6Q8IXY8 311 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 KLHDC9Q8NEP7 349 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 IL17RDQ8NFM7 739 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 PLAC1Q9HBJ0 212 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 WASH6PQ9NQA3 447 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 GNPTGQ9UJJ9 305 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 OGDHLQ9ULD0 1010 aa10.97□□□□□ -0.65
SND1-201ENST00000354725 GOLGA8QA0A0J9YX86 632 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 GOLGA8OA6NCC3 632 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 GOLGA8NF8WBI6 632 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 INO80B-WBP1J3KQ70 363 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 SMPD1P17405 629 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 NR1H2P55055 460 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 SGCGQ13326 291 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 TMEM95Q3KNT9 176 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 GPR141Q7Z602 305 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
SND1-201ENST00000354725 OR5B17Q8NGF7 314 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 RAET1EQ8TD07 263 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 ZNF845Q96IR2 970 aaPredicted RBP10.96□□□□□ -0.65
SND1-201ENST00000354725 PSD2Q9BQI7 771 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 NIFKQ9BYG3 293 aaKnown RBP10.96□□□□□ -0.65
SND1-201ENST00000354725 UNC93B1Q9H1C4 597 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 TP63Q9H3D4 680 aaPredicted RBP10.96□□□□□ -0.65
SND1-201ENST00000354725 ABHD16BQ9H3Z7 469 aa10.96□□□□□ -0.65
SND1-201ENST00000354725 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
SND1-201ENST00000354725 CCRL2O00421 344 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 CD48P09326 243 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 WEE2P0C1S8 567 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 NAMPTP43490 491 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 PCP4P48539 62 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 MDH1BQ5I0G3 518 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 FBXL19Q6PCT2 694 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 TMEM270Q6UE05 265 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 EEPD1Q7L9B9 569 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 KIAA0319LQ8IZA0 1049 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 C4orf33Q8N1A6 199 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 PSD4Q8NDX1 1056 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 OR8H1Q8NGG4 311 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 CEP170P1Q96L14 293 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 C17orf80Q9BSJ5 609 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 ZFP69BQ9UJL9 534 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 Q9Y3F1 56 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 SCO2O43819 266 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 TMEM63AO94886 807 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 GSTM1P09488 218 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 THRAP10827 490 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 MAGEA6P43360 314 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 AQP4P55087 323 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 XIAPP98170 497 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 SMARCB1Q12824 385 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 SELENBP1Q13228 472 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 TARBP2Q15633 366 aaKnown RBP10.96□□□□□ -0.66
SND1-201ENST00000354725 HIF1AQ16665 826 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms