RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 TBK1Q9UHD2 729 aa7.9□□□□□ -1.14
UBE2D3-204ENST00000349311 SYNPO2Q9UMS6 1093 aa7.9□□□□□ -1.14
UBE2D3-204ENST00000349311 HBS1LQ9Y450 684 aaKnown RBP7.9□□□□□ -1.14
UBE2D3-204ENST00000349311 PTPRFP10586 1907 aa7.9□□□□□ -1.15
UBE2D3-204ENST00000349311 ZNFX1Q9P2E3 1918 aaKnown RBP7.9□□□□□ -1.15
UBE2D3-204ENST00000349311 C15orf38-AP3S2A0A0A6YYH1 394 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 LCHNA4D1U4 455 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 hCG_1984214I3L0E3 225 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 K7ESF4 209 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 FZD9O00144 591 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 FCHO1O14526 889 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 P4HA2O15460 535 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 DENRO43583 198 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 PRICKLE3O43900 615 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 TRMUO75648 421 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 TNFAIP8O95379 198 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ZNF888P0CJ79 500 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 SMIM18P0DKX4 95 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 VCLP18206 1134 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 NR2F2P24468 414 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 CHKAP35790 457 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 PPARGP37231 505 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 MAGEA4P43358 317 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 HSPA13P48723 471 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 NEK2P51955 445 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 NR1H2P55055 460 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 NUP107P57740 925 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ZNF280AP59817 542 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 GPC5P78333 572 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 COG7P83436 770 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 CXCL9Q07325 125 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ZBTB17Q13105 803 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 USP10Q14694 798 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 KIF22Q14807 665 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 DLGAP5Q15398 846 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 SIX1Q15475 284 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 CCDC153Q494R4 210 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 C1orf146Q5VVC0 180 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 KLHL35Q6PF15 583 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 LVRNQ6Q4G3 990 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 UGT2A3Q6UWM9 527 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 FRMD7Q6ZUT3 714 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 HEATR3Q7Z4Q2 680 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 BMP8AQ7Z5Y6 402 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ARPINQ7Z6K5 226 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 FAM124AQ86V42 546 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ERI1Q8IV48 349 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 SLC41A1Q8IVJ1 513 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 SLC15A3Q8IY34 581 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ULK2Q8IYT8 1036 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ZNF713Q8N859 430 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 PPP1R14CQ8TAE6 165 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 DEPTORQ8TB45 409 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 CASP10Q92851 521 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 NKD2Q969F2 451 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 MTBPQ96DY7 904 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 DYNLL2Q96FJ2 89 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 TMEM120AQ9BXJ8 343 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 RBM38Q9H0Z9 239 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 C1orf21Q9H246 121 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 POFUT1Q9H488 388 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 ZNF696Q9H7X3 374 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 SLCO1B3Q9NPD5 702 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 INIPQ9NRY2 104 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 TBC1D23Q9NUY8 699 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 GCNT4Q9P109 453 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 PSMC3IPQ9P2W1 217 aaPredicted RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 FETUBQ9UGM5 382 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 TAGLN3Q9UI15 199 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 HERC5Q9UII4 1024 aaKnown RBP7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 MSRAQ9UJ68 235 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 INVSQ9Y283 1065 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 PTPN22Q9Y2R2 807 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 PAPPA2Q9BXP8 1791 aa7.89□□□□□ -1.15
UBE2D3-204ENST00000349311 IGSF9BQ9UPX0 1349 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ESYT2A0FGR8 921 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 PDXKO00764 312 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 TXNDC9O14530 226 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 CASQ2O14958 399 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ADAMTS3O15072 1205 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 SPOPO43791 374 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 TYROBPO43914 113 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 CETPP11597 493 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ABCB4P21439 1286 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 SHMT1P34896 483 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 ADCY8P40145 1251 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 NAPAP54920 295 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 HDAC4P56524 1084 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 PDCD1Q15116 288 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 SLC1A5Q15758 541 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 BCL2A1Q16548 175 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 EFHC1Q5JVL4 640 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 HYIQ5T013 277 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 PRAMEF9Q5VWM5 478 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 IZUMO3Q5VZ72 239 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 RNF219Q5W0B1 726 aaPredicted RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 THOC7Q6I9Y2 204 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 RWDD4Q6NW29 188 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 TATDN1Q6P1N9 297 aa7.88□□□□□ -1.15
UBE2D3-204ENST00000349311 RAPH1Q70E73 1250 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms