RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 KRT33BQ14525 404 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 SNX17Q15036 470 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 C11orf74Q86VG3 221 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 HS6ST3Q8IZP7 471 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 OR52K2Q8NGK3 314 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 LRTOMTQ8WZ04 291 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 FBXO32Q969P5 355 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 SH3KBP1Q96B97 665 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 RHOJQ9H4E5 214 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 CHRAC1Q9NRG0 131 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 SLC12A8A0AV02 714 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 FAM149AA5PLN7 773 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 TK2O00142 265 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 PTPN1P18031 435 aaKnown RBP14.98□□□□□ -0.01
RRP1B-201ENST00000340648 ALOX12P18054 663 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 PRIM2P49643 509 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 MMP14P50281 582 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 TNK2Q07912 1038 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 GLB1LQ6UWU2 654 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 CUZD1Q86UP6 607 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 LZTR1Q8N653 840 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 PPP1R13LQ8WUF5 828 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 SMARCD1Q96GM5 515 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 QKIQ96PU8 341 aaKnown RBP eCLIP14.98□□□□□ -0.01
RRP1B-201ENST00000340648 SCUBE2Q9NQ36 999 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 TPRKBQ9Y3C4 175 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 NR2E3Q9Y5X4 410 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 MYCP01106 439 aaPredicted RBP14.98□□□□□ -0.01
RRP1B-201ENST00000340648 SERPINF2P08697 491 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 KRR1Q13601 381 aaKnown RBP14.98□□□□□ -0.01
RRP1B-201ENST00000340648 PLCL1Q15111 1095 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 TTC23LQ6PF05 361 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 IL27RAQ6UWB1 636 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 LCLAT1Q6UWP7 414 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 TRIM69Q86WT6 500 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 ANKRD13AQ8IZ07 590 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 MPP5Q8N3R9 675 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 LPCAT1Q8NF37 534 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 OR7A2PQ8NGA2 310 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 MFSD3Q96ES6 412 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 REXO4Q9GZR2 422 aaKnown RBP14.98□□□□□ -0.01
RRP1B-201ENST00000340648 PCDHB12Q9Y5F1 795 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 B4GALT4O60513 344 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 DLG1Q12959 904 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 TTLL9Q3SXZ7 439 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 WSCD1Q658N2 575 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 ACTR8Q9H981 624 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 ZNF358Q9NW07 568 aa14.98□□□□□ -0.01
RRP1B-201ENST00000340648 SLC15A5A6NIM6 579 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 CLDN5O00501 218 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 OXCT1P55809 520 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 CELF3Q5SZQ8 465 aaKnown RBP14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SPESP1Q6UW49 350 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SPPL2CQ8IUH8 684 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SYTL1Q8IYJ3 562 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PARP8Q8N3A8 854 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SVOPQ8N4V2 548 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 C1orf127Q8N9H9 656 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PCDH19Q8TAB3 1148 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 UTP15Q8TED0 518 aaKnown RBP14.97□□□□□ -0.01
RRP1B-201ENST00000340648 MROH8Q9H579 483 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 RAMP2O60895 175 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 LGALS2P05162 132 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 JAK1P23458 1154 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 CLCN5P51795 746 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 BNIP2Q12982 314 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 MOGSQ13724 837 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 ARHGEF7Q14155 803 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SAPCD2Q86UD0 394 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 NDRG1Q92597 394 aaKnown RBP14.97□□□□□ -0.01
RRP1B-201ENST00000340648 BORCS5Q969J3 196 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 NDEL1Q9GZM8 345 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SPASTQ9UBP0 616 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 CAB39Q9Y376 341 aaPredicted RBP14.97□□□□□ -0.01
RRP1B-201ENST00000340648 FADS3Q9Y5Q0 445 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.97□□□□□ -0.01
RRP1B-201ENST00000340648 METTL18O95568 372 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 LINC00032P0C843 101 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 CDH3P22223 829 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 BDNFP23560 247 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 LIMK2P53671 638 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 ZNF177Q13360 481 aaPredicted RBP14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PWP1Q13610 501 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 ADGRE1Q14246 886 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 GRM3Q14832 879 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 TMEM63BQ5T3F8 832 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 FSTL4Q6MZW2 842 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PMF1Q6P1K2 205 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PKN3Q6P5Z2 889 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 UNC5BQ8IZJ1 945 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PYROXD2Q8N2H3 581 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SETD9Q8NE22 299 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 LMO3Q8TAP4 145 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 NXNL1Q96CM4 212 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 TXLNGYQ9BZA5 131 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 PIDD1Q9HB75 910 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SELENONQ9NZV5 590 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 DOLKQ9UPQ8 538 aa14.97□□□□□ -0.01
RRP1B-201ENST00000340648 SATB2Q9UPW6 733 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms