RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 OR6Q1Q8NGQ2 317 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 RHOXF1Q8NHV9 184 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 UTP15Q8TED0 518 aaKnown RBP8.71□□□□□ -1.02
TDP1-201ENST00000335725 SMG7Q92540 1137 aaKnown RBP8.71□□□□□ -1.02
TDP1-201ENST00000335725 LPPQ93052 612 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 BBS4Q96RK4 519 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 SLC19A3Q9BZV2 496 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 STARD7Q9NQZ5 370 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 ACSL5Q9ULC5 683 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 ENTPD4Q9Y227 616 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 PCDHAC2Q9Y5I4 1007 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 PMF1-BGLAPU3KQ54 211 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 PPLO60437 1756 aa8.71□□□□□ -1.02
TDP1-201ENST00000335725 EFCAB10A6NFE3 127 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 A8MUA0 341 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 LINC00587B1AMM8 73 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 WRBO00258 174 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 HTRA2O43464 458 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 CHMP2AO43633 222 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 KLRC4O43908 158 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ABCB7O75027 752 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 PTPN1P18031 435 aaKnown RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 ANTXR2P58335 489 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ABRQ12979 859 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 MTMR2Q13614 643 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 PPP2R5DQ14738 602 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 HIST2H2ACQ16777 129 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 UBQLNLQ8IYU4 475 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 TMEM102Q8N9M5 508 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 TP53I13Q8NBR0 393 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 ZBTB44Q8NCP5 570 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 EEF2KMTQ96G04 330 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 HS6ST2Q96MM7 605 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 FOPNLQ96NB1 174 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 QKIQ96PU8 341 aaKnown RBP eCLIP8.7□□□□□ -1.027e-10■■■■■ 43.3
TDP1-201ENST00000335725 BCL2L14Q9BZR8 327 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 LRRC19Q9H756 370 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 CD320Q9NPF0 282 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 GMPR2Q9P2T1 348 aaKnown RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 CLEC4AQ9UMR7 237 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 TCAF1Q9Y4C2 921 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ACTL7AQ9Y615 435 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 NCANO14594 1321 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 KRT87PA6NCN2 255 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 C2orf71A6NGG8 1288 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 NOP56O00567 594 aaKnown RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 BCAS1O75363 584 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 ATG7O95352 703 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 GOT2P00505 430 aaKnown RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 IL6P05231 212 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 HEXBP07686 556 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 BMP4P12644 408 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 MATN1P21941 496 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 MEOX2P50222 304 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 AQP5P55064 265 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 SLC18A2Q05940 514 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 UBE2SQ16763 222 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 TTC38Q5R3I4 469 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 CCNYL2Q5T2Q4 361 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 CENPPQ6IPU0 288 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 PYHIN1Q6K0P9 492 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 CRTC3Q6UUV7 619 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 MACC1Q6ZN28 852 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 MAMDC2Q7Z304 686 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 ANKS1BQ7Z6G8 1248 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 MCUQ8NE86 351 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 PHOSPHO2Q8TCD6 241 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 BLOC1S5Q8TDH9 187 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ST8SIA2Q92186 375 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 TFAP2CQ92754 450 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 SGTBQ96EQ0 304 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ST6GAL2Q96JF0 529 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 GDF15Q99988 308 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 KCTD14Q9BQ13 255 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 LMAN2LQ9H0V9 348 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 C14orf93Q9H972 538 aaKnown RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 ERVK-19Q9WJR5 959 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 DCCP43146 1447 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ARGFXA6NJG6 315 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 PRMT3O60678 531 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 APBB3O95704 486 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 CDK1P06493 297 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 TMEM253P0C7T8 217 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 EPHA3P29320 983 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ARSDP51689 593 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 RAC1P63000 192 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 PTK6Q13882 451 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 IDI1Q13907 227 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 HYIQ5T013 277 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 RNF207Q6ZRF8 634 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 UTS2BQ765I0 119 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 C16orf62Q7Z3J2 963 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 SNX29P2Q8IUI4 249 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ARID3BQ8IVW6 561 aaPredicted RBP8.7□□□□□ -1.02
TDP1-201ENST00000335725 SULF1Q8IWU6 871 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 ZSWIM2Q8NEG5 633 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 CERKQ8TCT0 537 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 RAET1EQ8TD07 263 aa8.7□□□□□ -1.02
TDP1-201ENST00000335725 C9orf72Q96LT7 481 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms