RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TADA1Q96BN2 335 aa21.82■■□□□ 1.08
TPM1-204ENST00000334895 SEMA3CQ99985 751 aa21.82■■□□□ 1.08
TPM1-204ENST00000334895 TM6SF2Q9BZW4 377 aa21.82■■□□□ 1.08
TPM1-204ENST00000334895 NEUROG2Q9H2A3 272 aa21.82■■□□□ 1.08
TPM1-204ENST00000334895 TNKS2Q9H2K2 1166 aa21.82■■□□□ 1.08
TPM1-204ENST00000334895 UBP1Q9NZI7 540 aa21.82■■□□□ 1.08
TPM1-204ENST00000334895 TTC34A8MYJ7 566 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 TMEM63AO94886 807 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 MT-CYBP00156 380 aaPredicted RBP21.81■■□□□ 1.08
TPM1-204ENST00000334895 GLULP15104 373 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 HSPA9P38646 679 aaKnown RBP21.81■■□□□ 1.08
TPM1-204ENST00000334895 EMC10Q5UCC4 262 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 HIBCHQ6NVY1 386 aaPredicted RBP21.81■■□□□ 1.08
TPM1-204ENST00000334895 METTL3Q86U44 580 aaKnown RBP21.81■■□□□ 1.08
TPM1-204ENST00000334895 IFT20Q8IY31 132 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 NAT8LQ8N9F0 302 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 VOPP1Q96AW1 172 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 ISG20Q96AZ6 181 aaKnown RBP21.81■■□□□ 1.08
TPM1-204ENST00000334895 RBM15Q96T37 977 aaKnown RBP eCLIP21.81■■□□□ 1.08
TPM1-204ENST00000334895 PARD6BQ9BYG5 372 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 CEP44Q9C0F1 390 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 FAM114A2Q9NRY5 505 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 ZDHHC18Q9NUE0 388 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 STARD13Q9Y3M8 1113 aa21.81■■□□□ 1.08
TPM1-204ENST00000334895 ITIH2P19823 946 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 VSNL1P62760 191 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 NSUN2Q08J23 767 aaKnown RBP eCLIP21.8■■□□□ 1.08
TPM1-204ENST00000334895 EGFLAMQ63HQ2 1017 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 KCTD11Q693B1 232 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 PPIL6Q8IXY8 311 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 IFT81Q8WYA0 676 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 PRCCQ92733 491 aaPredicted RBP21.8■■□□□ 1.08
TPM1-204ENST00000334895 ART4Q93070 314 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 NUDCD1Q96RS6 583 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 MTG2Q9H4K7 406 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 NOD2Q9HC29 1040 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 ZDHHC4Q9NPG8 344 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 EGFP01133 1207 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 APRTP07741 180 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 MYBL2P10244 700 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 CD86P42081 329 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 TNFRSF4P43489 277 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 SCNN1BP51168 640 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 SKOR1P84550 965 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 ZNF234Q14588 700 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 TPRG1Q6ZUI0 275 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 Q6ZVU0 165 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 PDCD7Q8N8D1 485 aaKnown RBP21.8■■□□□ 1.08
TPM1-204ENST00000334895 FBXO25Q8TCJ0 367 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 RUBCNQ92622 972 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 EXOC4Q96A65 974 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 ACOX2Q99424 681 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 THAP10Q9P2Z0 257 aaPredicted RBP21.8■■□□□ 1.08
TPM1-204ENST00000334895 PLA2G4CQ9UP65 541 aa21.8■■□□□ 1.08
TPM1-204ENST00000334895 INSIG1O15503 277 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 TNFRSF8P28908 595 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 KIR2DL1P43626 348 aaPredicted RBP21.79■■□□□ 1.08
TPM1-204ENST00000334895 PLTPP55058 493 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 OLIG2Q13516 323 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 CUL1Q13616 776 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 MLF2Q15773 248 aaPredicted RBP21.79■■□□□ 1.08
TPM1-204ENST00000334895 ACCSLQ4AC99 568 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 WDR93Q6P2C0 686 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 KDELC1Q6UW63 502 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 GSPT2Q8IYD1 628 aaKnown RBP21.79■■□□□ 1.08
TPM1-204ENST00000334895 PCDH20Q8N6Y1 951 aaKnown RBP21.79■■□□□ 1.08
TPM1-204ENST00000334895 ZNF366Q8N895 744 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 KDM1BQ8NB78 822 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 MSANTD3Q96H12 275 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 TMEM245Q9H330 911 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 ANAPC5Q9UJX4 755 aa21.79■■□□□ 1.08
TPM1-204ENST00000334895 GSRP00390 522 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 TPSB2P20231 275 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 CD72P21854 359 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 IL12RB1P42701 662 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 CALCOCO2Q13137 446 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 SPARCL1Q14515 664 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 MORF4L2Q15014 288 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 TPSAB1Q15661 275 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 NCEH1Q6PIU2 408 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 NUDT18Q6ZVK8 323 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 PCGF5Q86SE9 256 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 SRLQ86TD4 932 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 BBOF1Q8ND07 529 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 OR2AP1Q8NGE2 309 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 OR6K2Q8NGY2 324 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 UCMAQ8WVF2 138 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 SCUBE2Q9NQ36 999 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 EIF2B3Q9NR50 452 aaKnown RBP21.78■■□□□ 1.08
TPM1-204ENST00000334895 RAB21Q9UL25 225 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 NFU1Q9UMS0 254 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 SHOC2Q9UQ13 582 aa21.78■■□□□ 1.08
TPM1-204ENST00000334895 ANKRD36A6QL64 1941 aa21.77■■□□□ 1.08
TPM1-204ENST00000334895 E7EVH7 732 aa21.77■■□□□ 1.08
TPM1-204ENST00000334895 AP2A1O95782 977 aa21.77■■□□□ 1.08
TPM1-204ENST00000334895 HLA-EP13747 358 aa21.77■■□□□ 1.08
TPM1-204ENST00000334895 HNRNPLP14866 589 aaKnown RBP eCLIP21.77■■□□□ 1.084e-7■■□□□ 13.3
TPM1-204ENST00000334895 PRKCHP24723 683 aa21.77■■□□□ 1.08
TPM1-204ENST00000334895 GKP32189 559 aa21.77■■□□□ 1.08
TPM1-204ENST00000334895 NNMTP40261 264 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms