RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PLOD1Q02809 727 aaPredicted RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TBL3Q12788 808 aaKnown RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TAC4Q86UU9 113 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TRABD2AQ86V40 505 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 DDIASQ8IXT1 998 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 C12orf76Q8N812 135 aaPredicted RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF557Q8N988 423 aaPredicted RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 MAGEC3Q8TD91 643 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 BTN2A3PQ96KV6 586 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 BBS2Q9BXC9 721 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 GPR88Q9GZN0 384 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 BRD9Q9H8M2 597 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 PNPLA8Q9NP80 782 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 STX18Q9P2W9 335 aaKnown RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 SYCE1LA8MT33 242 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 AHCYL1O43865 530 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 JCHAINP01591 159 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 PTPN9P43378 593 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 ITGA9Q13797 1035 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 SLC1A5Q15758 541 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TXNDC8Q6A555 127 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TIGD7Q6NT04 549 aaPredicted RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 PIGWQ7Z7B1 504 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 LRRTM3Q86VH5 581 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 KATNAL2Q8IYT4 538 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF786Q8N393 782 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 GSTCDQ8NEC7 633 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 SKA2Q8WVK7 121 aaPredicted RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 PRPF18Q99633 342 aaKnown RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 CEP41Q9BYV8 373 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 UNKQ9C0B0 810 aaKnown RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 PRDM12Q9H4Q4 367 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TBC1D14Q9P2M4 693 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TBC1D3BA6NDS4 549 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 C2CD4BA6NLJ0 364 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 GABRDO14764 452 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 GRM6O15303 877 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 NCAM2O15394 837 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 PEX1O43933 1283 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 POLNQ7Z5Q5 900 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ARL8BQ9NVJ2 186 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 DZANK1Q9NVP4 752 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF510Q9Y2H8 683 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 HBS1LQ9Y450 684 aaKnown RBP11.95□□□□□ -0.5
HDAC6-201ENST00000334136 TBL1XO60907 577 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 USP1O94782 785 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 FSHRP23945 695 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 PCYT1AP49585 367 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 TAS2R40P59535 323 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 BLMHQ13867 455 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ARMC3Q5W041 872 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 C16orf89Q6UX73 402 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF572Q7Z3I7 529 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-201ENST00000334136 APOL2Q9BQE5 337 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 DCUN1D5Q9BTE7 237 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ZYG11BQ9C0D3 744 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 SLC17A7Q9P2U7 560 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF212Q9UDV6 495 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 TSR3Q9UJK0 312 aaKnown RBP11.95□□□□□ -0.5
HDAC6-201ENST00000334136 FSCN2O14926 492 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 TGM5O43548 720 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 FASTKD3Q14CZ7 662 aaKnown RBP11.95□□□□□ -0.5
HDAC6-201ENST00000334136 PCSK7Q16549 785 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 CLNKQ7Z7G1 428 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 MRPL43Q8N983 215 aaKnown RBP11.95□□□□□ -0.5
HDAC6-201ENST00000334136 HJURPQ8NCD3 748 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-201ENST00000334136 MECRQ9BV79 373 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ZFP14Q9HCL3 533 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 TBC1D23Q9NUY8 699 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 TMLHEQ9NVH6 421 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 COMMD8Q9NX08 183 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 PLK2Q9NYY3 685 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 GRHL1Q9NZI5 618 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 SCML2Q9UQR0 700 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 ORC6Q9Y5N6 252 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 RLFQ13129 1914 aa11.95□□□□□ -0.5
HDAC6-201ENST00000334136 FGF10O15520 208 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 LRCH4O75427 683 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 RALBP11234 206 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 IL10P22301 178 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 SPRP35270 261 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 TEDDM1Q5T9Z0 273 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 SYPL2Q5VXT5 272 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 ALYREFQ86V81 257 aaKnown RBP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 CYP4X1Q8N118 509 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 RFWD2Q8NHY2 731 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 DDX1Q92499 740 aaKnown RBP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 APOPT1Q96IL0 206 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 CLPTM1LQ96KA5 538 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 RFPL2O75678 378 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 POLBP06746 335 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 RHOAP61586 193 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 CBX2Q14781 532 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 TRIP4Q15650 581 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 KHDC1Q4VXA5 237 aaKnown RBP11.94□□□□□ -0.5
HDAC6-201ENST00000334136 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
HDAC6-201ENST00000334136 NCLNQ969V3 563 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms