RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 PBKQ96KB5 322 aa26.33■■□□□ 1.8
SMDT1-201ENST00000331479 NSMCE3Q96MG7 304 aa26.33■■□□□ 1.8
SMDT1-201ENST00000331479 QKIQ96PU8 341 aaKnown RBP eCLIP26.33■■□□□ 1.8
SMDT1-201ENST00000331479 MGME1Q9BQP7 344 aa26.33■■□□□ 1.8
SMDT1-201ENST00000331479 CEP41Q9BYV8 373 aa26.33■■□□□ 1.8
SMDT1-201ENST00000331479 ZDHHC6Q9H6R6 413 aa26.33■■□□□ 1.8
SMDT1-201ENST00000331479 SEPT10Q9P0V9 454 aa26.33■■□□□ 1.8
SMDT1-201ENST00000331479 H7C0C1 242 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 KRIT1O00522 736 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 LEFTY1O75610 366 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 ATP5OP48047 213 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 NRLP54845 237 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 IFI35P80217 286 aaPredicted RBP26.32■■□□□ 1.8
SMDT1-201ENST00000331479 NSUN2Q08J23 767 aaKnown RBP eCLIP26.32■■□□□ 1.8
SMDT1-201ENST00000331479 SLC45A4Q5BKX6 768 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 WDR5BQ86VZ2 330 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 TTC13Q8NBP0 860 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 RLN3Q8WXF3 142 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 IL12RB2Q99665 862 aa26.32■■□□□ 1.8
SMDT1-201ENST00000331479 FAM126AQ9BYI3 521 aaPredicted RBP26.32■■□□□ 1.8
SMDT1-201ENST00000331479 HACD1B0YJ81 288 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 POP4O95707 220 aaKnown RBP26.31■■□□□ 1.8
SMDT1-201ENST00000331479 RBP3P10745 1247 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 SLC8A1P32418 973 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 SIX1Q15475 284 aaPredicted RBP26.31■■□□□ 1.8
SMDT1-201ENST00000331479 DSG4Q86SJ6 1040 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 BBS5Q8N3I7 341 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 CNTD1Q8N815 330 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 FRMD1Q8N878 549 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 TMIEQ8NEW7 156 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 ATG4AQ8WYN0 398 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 NAPGQ99747 312 aaPredicted RBP26.31■■□□□ 1.8
SMDT1-201ENST00000331479 PRRX2Q99811 253 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 INVSQ9Y283 1065 aa26.31■■□□□ 1.8
SMDT1-201ENST00000331479 ZNF185O15231 689 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 DNTTP04053 509 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 HLA-DQB2P05538 268 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 CR2P20023 1033 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 RBL1P28749 1068 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 SCNN1BP51168 640 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 SRLQ86TD4 932 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 RASGEF1CQ8N431 466 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 AADATQ8N5Z0 425 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 PABPC3Q9H361 631 aaKnown RBP26.3■■□□□ 1.8
SMDT1-201ENST00000331479 ITM2CQ9NQX7 267 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 ZSCAN32Q9NX65 697 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 USP36Q9P275 1121 aaKnown RBP26.3■■□□□ 1.8
SMDT1-201ENST00000331479 SERGEFQ9UGK8 458 aa26.3■■□□□ 1.8
SMDT1-201ENST00000331479 ADH1BP00325 375 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 PRNPP04156 253 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 ACADMP11310 421 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 HSPA9P38646 679 aaKnown RBP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 CSNK1DP48730 415 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 TPMTP51580 245 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 ETF1P62495 437 aaKnown RBP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 ZBTB16Q05516 673 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 WASHC5Q12768 1159 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 SRSF5Q13243 272 aaKnown RBP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 LONRF2Q1L5Z9 754 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 PAPD7Q5XG87 772 aaKnown RBP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 FAM160A2Q8N612 972 aaPredicted RBP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 ZBTB44Q8NCP5 570 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 SLC35B2Q8TB61 432 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 HTR3CQ8WXA8 447 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 SMARCAL1Q9NZC9 954 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 DNPEPQ9ULA0 475 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 TTLL3Q9Y4R7 772 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 CTAGE9A4FU28 777 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 C1QTNF3-AMACRE9PGA6 284 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 PLK4O00444 970 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 KPNA3O00505 521 aaPredicted RBP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 C5AR1P21730 350 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 PTPN3P26045 913 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 MAP7D1Q3KQU3 841 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 DARS2Q6PI48 645 aaKnown RBP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 NYAP1Q6ZVC0 841 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.29■■□□□ 1.8
SMDT1-201ENST00000331479 C1orf54Q8WWF1 131 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 AGAP3Q96P47 875 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 CYP8B1Q9UNU6 501 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 ATP8A1Q9Y2Q0 1164 aa26.29■■□□□ 1.8
SMDT1-201ENST00000331479 A0A1W2PP55 124 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 PIGNO95427 931 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 UGT2B4P06133 528 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 DRD3P35462 400 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 ITKQ08881 620 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 TEX44Q53QW1 395 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 FAM46CQ5VWP2 391 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 ARRDC3Q96B67 414 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 NUDCD1Q96RS6 583 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 CPEB1Q9BZB8 566 aaKnown RBP26.28■■□□□ 1.8
SMDT1-201ENST00000331479 NOD2Q9HC29 1040 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 FBXL12Q9NXK8 326 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 AMACRQ9UHK6 382 aa26.28■■□□□ 1.8
SMDT1-201ENST00000331479 HRO43593 1189 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 NEBLO76041 1014 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 P2RY2P41231 377 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 RAD51Q06609 339 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 IHHQ14623 411 aa26.27■■□□□ 1.8
SMDT1-201ENST00000331479 USP39Q53GS9 565 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms