RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 TAF2Q6P1X5 1199 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 ZMIZ2Q8NF64 920 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 WDR55Q9H6Y2 383 aaPredicted RBP20.15■□□□□ 0.82
SOX2-201ENST00000325404 RAB26Q9ULW5 256 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 COMMD3-BMI1R4GMX3 469 aa20.15■□□□□ 0.82
SOX2-201ENST00000325404 TK2O00142 265 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 AIM2O14862 343 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 AMHP03971 560 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 FOLH1Q04609 750 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 PRKCZQ05513 592 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 NOGQ13253 232 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 LRRC36Q1X8D7 754 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 LRRC8EQ6NSJ5 796 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 BEND5Q7L4P6 421 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 BHLHA9Q7RTU4 235 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 LSMEM2Q8N112 164 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 ADCY4Q8NFM4 1077 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 ADAM32Q8TC27 787 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 SENP8Q96LD8 212 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 FCRL5Q96RD9 977 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 EFCAB1Q9HAE3 211 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 ZBTB26Q9HCK0 441 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 CDH9Q9ULB4 789 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 INPP5FQ9Y2H2 1132 aa20.14■□□□□ 0.82
SOX2-201ENST00000325404 TRIP12Q14669 1992 aaPredicted RBP20.14■□□□□ 0.81
SOX2-201ENST00000325404 HHLA1C9JL84 531 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 ANXA9O76027 345 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 LRIG2O94898 1065 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 DNAJB13P59910 316 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 RAB10P61026 200 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 POTEHQ6S545 545 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 CENPLQ8N0S6 344 aaPredicted RBP20.14■□□□□ 0.81
SOX2-201ENST00000325404 FSTL5Q8N475 847 aaPredicted RBP20.14■□□□□ 0.81
SOX2-201ENST00000325404 MAELQ96JY0 434 aaKnown RBP20.14■□□□□ 0.81
SOX2-201ENST00000325404 GPR78Q96P69 363 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 HAPLN3Q96S86 360 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 UBE2OQ9C0C9 1292 aaKnown RBP20.14■□□□□ 0.81
SOX2-201ENST00000325404 VCX3AQ9NNX9 186 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 ZDHHC2Q9UIJ5 367 aa20.14■□□□□ 0.81
SOX2-201ENST00000325404 TRPC5OSA6NMA1 111 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 PGK1P00558 417 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 AHSGP02765 367 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 HSPA1AP0DMV8 641 aaKnown RBP20.13■□□□□ 0.81
SOX2-201ENST00000325404 HSPA1BP0DMV9 641 aaKnown RBP20.13■□□□□ 0.81
SOX2-201ENST00000325404 TPH1P17752 444 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 EPHA3P29320 983 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 ABCG1P45844 678 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 KPNA2P52292 529 aaKnown RBP20.13■□□□□ 0.81
SOX2-201ENST00000325404 NAGLUP54802 743 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 RARS2Q5T160 578 aaKnown RBP20.13■□□□□ 0.81
SOX2-201ENST00000325404 AP1ARQ63HQ0 302 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 HIPK4Q8NE63 616 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 CDRT15Q96T59 188 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 TRIM62Q9BVG3 475 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 TKTL2Q9H0I9 626 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 UPF3AQ9H1J1 476 aaKnown RBP20.13■□□□□ 0.81
SOX2-201ENST00000325404 CSNK1G1Q9HCP0 422 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 UTP6Q9NYH9 597 aaKnown RBP20.13■□□□□ 0.81
SOX2-201ENST00000325404 SEPT4O43236 478 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 USP17L7P0C7H9 530 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 GABRB3P28472 473 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 GRAMD1BQ3KR37 738 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 CXCL17Q6UXB2 119 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 TICAM1Q8IUC6 712 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 SCYL1Q96KG9 808 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 TBL1YQ9BQ87 522 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 APOL2Q9BQE5 337 aa20.13■□□□□ 0.81
SOX2-201ENST00000325404 TSPYL2Q9H2G4 693 aaPredicted RBP20.13■□□□□ 0.81
SOX2-201ENST00000325404 A0A087X1B8 175 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 DLX3O60479 287 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 ADGRE1Q14246 886 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 FLOT2Q14254 428 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 GPRIN1Q7Z2K8 1008 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 PIWIL4Q7Z3Z4 852 aaKnown RBP20.12■□□□□ 0.81
SOX2-201ENST00000325404 EFCAB3Q8N7B9 438 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 KCTD4Q8WVF5 259 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 SMARCD1Q96GM5 515 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 PCED1BQ96HM7 432 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 PLK2Q9NYY3 685 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 HACD3Q9P035 362 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 BCAS2O75934 225 aaPredicted RBP20.12■□□□□ 0.81
SOX2-201ENST00000325404 MYCNP04198 464 aaPredicted RBP20.12■□□□□ 0.81
SOX2-201ENST00000325404 ME2P23368 584 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 ARCN1P48444 511 aaKnown RBP20.12■□□□□ 0.81
SOX2-201ENST00000325404 PSMD8P48556 350 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 HSPA13P48723 471 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 THOP1P52888 689 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 LZTR1Q8N653 840 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 KDM1BQ8NB78 822 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 DCUN1D1Q96GG9 259 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 FAR2Q96K12 515 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 LRGUKQ96M69 825 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 IL12RB2Q99665 862 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 MRPL57Q9BQC6 102 aaKnown RBP20.12■□□□□ 0.81
SOX2-201ENST00000325404 NUF2Q9BZD4 464 aa20.12■□□□□ 0.81
SOX2-201ENST00000325404 MRPL46Q9H2W6 279 aaKnown RBP20.12■□□□□ 0.81
SOX2-201ENST00000325404 MRPL40Q9NQ50 206 aaKnown RBP20.12■□□□□ 0.81
SOX2-201ENST00000325404 PHGDHO43175 533 aaKnown RBP20.11■□□□□ 0.81
SOX2-201ENST00000325404 STMN1P16949 149 aa20.11■□□□□ 0.81
SOX2-201ENST00000325404 RAB27AP51159 221 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms