RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MED28Q9H204 178 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CLN6Q9NWW5 311 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 GREB1Q4ZG55 1949 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 XIRP1Q702N8 1843 aaKnown RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FAM220BPB1ANY3 271 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CCRL2O00421 344 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 IFI30P13284 250 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 GLDCP23378 1020 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ADORA2BP29275 332 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 MTHFRP42898 656 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 HARS2P49590 506 aaKnown RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PLEKHG6Q3KR16 790 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 C5orf22Q49AR2 442 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 AADACL2Q6P093 401 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 POLNQ7Z5Q5 900 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 LRRC71Q8N4P6 559 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SLC44A1Q8WWI5 657 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CENPIQ92674 756 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 RCN3Q96D15 328 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 HAPLN3Q96S86 360 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 IRF2BPLQ9H1B7 796 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ERGIC3Q9Y282 383 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ADAMTS13Q76LX8 1427 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ATRXP46100 2492 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 RGS10O43665 173 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 C6orf222P0C671 652 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CYP1B1Q16678 543 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 METTL21CQ5VZV1 264 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ERMAPQ96PL5 475 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CYP4F12Q9HCS2 524 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SUCOQ9UBS9 1254 aaKnown RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PHF11Q9UIL8 331 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 GMPPBQ9Y5P6 360 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TULP3O75386 442 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SDC2P34741 201 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 CHI3L1P36222 383 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ARPP19P56211 112 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ECT2LQ008S8 904 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FNBP1LQ5T0N5 605 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SLFN11Q7Z7L1 901 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SPOCK2Q92563 424 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 RERGLQ9H628 205 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TLL2Q9Y6L7 1015 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 BTBD19C9JJ37 291 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 KLRC4O43908 158 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 IFNA16P05015 189 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TCF4P15884 667 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 PRKACBP22694 351 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 STARP49675 285 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 SEC23AQ15436 765 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 THAP5Q7Z6K1 395 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 ARMC8Q8IUR7 673 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 FCGR1BQ92637 280 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 MED30Q96HR3 178 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 TPD52L3Q96J77 140 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 MNTQ99583 582 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 AASDHPPTQ9NRN7 309 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 AKAP7Q9P0M2 348 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-201ENST00000322213 IKZF3Q9UKT9 509 aa7.13□□□□□ -1.27
SMC1A-201ENST00000322213 HLFQ16534 295 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 CIAPIN1Q6FI81 312 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 FASTKD5Q7L8L6 764 aaKnown RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 NECAB2Q7Z6G3 386 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ROPN1LQ96C74 230 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF560Q96MR9 790 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF341Q9BYN7 854 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 APOL3O95236 402 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 GPIP06744 558 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 BPGMP07738 259 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 LRRC74AQ0VAA2 488 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF181Q2M3W8 571 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 GOLGA7BQ2TAP0 167 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ZIK1Q3SY52 487 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 FAXCQ5TGI0 409 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 MRNIPQ6NTE8 343 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ELMOD2Q8IZ81 293 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PACRGLQ8N7B6 248 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 KIFC1Q9BW19 673 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 OXCT2Q9BYC2 517 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF701M0R085 212 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 LRIG2O94898 1065 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 MLNP12872 115 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ETFBP38117 255 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 C16orf46Q6P387 395 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 KLHL35Q6PF15 583 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF517Q6ZMY9 492 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PAGE2Q7Z2X7 111 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PIWIL4Q7Z3Z4 852 aaKnown RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 DPP10Q8N608 796 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 BLOC1S5Q8TDH9 187 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 EPS8L1Q8TE68 723 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SLCO2A1Q92959 643 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.12□□□□□ -1.271e-6■□□□□ 11.3
SMC1A-201ENST00000322213 AURKAO14965 403 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PDPK1O15530 556 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 PEX14O75381 377 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 MED24O75448 989 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 B3GALNT1O75752 331 aa7.12□□□□□ -1.27
SMC1A-201ENST00000322213 XPAP23025 273 aaPredicted RBP7.12□□□□□ -1.27
SMC1A-201ENST00000322213 SREBF1P36956 1147 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms