RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 KDELR3O43731 214 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 RFPL3O75679 317 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 TMCC1O94876 653 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 GSRP00390 522 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 UGT2B4P06133 528 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 PSMA2P25787 234 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 ABL2P42684 1182 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 RPS21P63220 83 aaKnown RBP19.84■□□□□ 0.77
LIME1-201ENST00000309546 OGDHQ02218 1023 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 TMEM259Q4ZIN3 620 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 SFMBT2Q5VUG0 894 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 KIAA1161Q6NSJ0 714 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 GCNT7Q6ZNI0 430 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 TMC6Q7Z403 805 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 PROSER1Q86XN7 944 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 DNAAF5Q86Y56 855 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 NETO2Q8NC67 525 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 MDM1Q8TC05 714 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 HMCESQ96FZ2 354 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 CATSPERBQ9H7T0 1116 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 GPATCH2LQ9NWQ4 482 aa19.84■□□□□ 0.77
LIME1-201ENST00000309546 ZSCAN5CA6NGD5 496 aaPredicted RBP19.83■□□□□ 0.77
LIME1-201ENST00000309546 C16orf96A6NNT2 1141 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 TAF4O00268 1085 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 NEMP1O14524 444 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 ACADVLP49748 655 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 ZNF165P49910 485 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 AIF1P55008 147 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 CLDN6P56747 220 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 TPI1P60174 286 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 ZNF805Q5CZA5 627 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 PPP1R2P3Q6NXS1 205 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 KANSL1Q7Z3B3 1105 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 PLPP6Q8IY26 295 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 LRIG1Q96JA1 1093 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 FEM1CQ96JP0 617 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 GDAP1L1Q96MZ0 367 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 SYT11Q9BT88 431 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 SLC17A9Q9BYT1 436 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 KLC2Q9H0B6 622 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 NOL6Q9H6R4 1146 aaKnown RBP19.83■□□□□ 0.77
LIME1-201ENST00000309546 ITM2BQ9Y287 266 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 PCDHGA1Q9Y5H4 931 aa19.83■□□□□ 0.77
LIME1-201ENST00000309546 ZFHX4Q86UP3 3567 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 A6NNZ2 444 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 RASA4BC9J798 803 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 RASA4O43374 803 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 IGSF6O95976 241 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 PAK4O96013 591 aaPredicted RBP19.82■□□□□ 0.76
LIME1-201ENST00000309546 RHOAP61586 193 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 MAMLD1Q13495 774 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 FGL2Q14314 439 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 SMAD1Q15797 465 aaKnown RBP19.82■□□□□ 0.76
LIME1-201ENST00000309546 MYLK3Q32MK0 819 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 Q6ZSR6 202 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 KLHL32Q96NJ5 620 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 HAUS4Q9H6D7 363 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 PARVAQ9NVD7 372 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 GGT7Q9UJ14 662 aa19.82■□□□□ 0.76
LIME1-201ENST00000309546 ARID1BQ8NFD5 2236 aaPredicted RBP19.82■□□□□ 0.76
LIME1-201ENST00000309546 CFAP47Q6ZTR5 3102 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 FGF10O15520 208 aaPredicted RBP19.81■□□□□ 0.76
LIME1-201ENST00000309546 FFAR2O15552 330 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 TSPAN6O43657 245 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 AP1G1O43747 822 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 POP4O95707 220 aaKnown RBP19.81■□□□□ 0.76
LIME1-201ENST00000309546 CAPNS1P04632 268 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 YBEYP58557 167 aaPredicted RBP19.81■□□□□ 0.76
LIME1-201ENST00000309546 RAD51Q06609 339 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 SGCGQ13326 291 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 HS1BP3Q53T59 392 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 ZNF542PQ5EBM4 170 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 LRRC73Q5JTD7 316 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 E4F1Q66K89 784 aaPredicted RBP19.81■□□□□ 0.76
LIME1-201ENST00000309546 ABI3BPQ7Z7G0 1075 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 SLC22A18ASQ8N1D0 253 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 VCPIP1Q96JH7 1222 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 OSBPL1AQ9BXW6 950 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 DHX35Q9H5Z1 703 aaKnown RBP19.81■□□□□ 0.76
LIME1-201ENST00000309546 CAAP1Q9H8G2 361 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 KLHL11Q9NVR0 708 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 AP4E1Q9UPM8 1137 aa19.81■□□□□ 0.76
LIME1-201ENST00000309546 A0A1B0GTH6 734 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 A0A1W2PQC6 194 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 IGLON5A6NGN9 336 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 RAD51BO15315 384 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 SERPINC1P01008 464 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 DGKAP23743 735 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 KLHL30Q0D2K2 578 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 PARP15Q460N3 678 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 PLEKHA7Q6IQ23 1121 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 GDPD4Q6W3E5 623 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 KYAT3Q6YP21 454 aaKnown RBP19.8■□□□□ 0.76
LIME1-201ENST00000309546 ZNF571Q7Z3V5 609 aaPredicted RBP19.8■□□□□ 0.76
LIME1-201ENST00000309546 CASKIN2Q8WXE0 1202 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 RAB7BQ96AH8 199 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 EXOC2Q96KP1 924 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 NAP1L5Q96NT1 182 aaPredicted RBP19.8■□□□□ 0.76
LIME1-201ENST00000309546 NCAPGQ9BPX3 1015 aa19.8■□□□□ 0.76
LIME1-201ENST00000309546 TTYH3Q9C0H2 523 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms