RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 SPPL2AQ8TCT8 520 aa16.22■□□□□ 0.19
ARHGEF28-201ENST00000296794 MTERF3Q96E29 417 aa16.22■□□□□ 0.19
ARHGEF28-201ENST00000296794 NDNQ99608 321 aa16.22■□□□□ 0.19
ARHGEF28-201ENST00000296794 LHX5Q9H2C1 402 aa16.22■□□□□ 0.19
ARHGEF28-201ENST00000296794 ABCC13Q9NSE7 274 aa16.22■□□□□ 0.19
ARHGEF28-201ENST00000296794 MTF2Q9Y483 593 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF28-201ENST00000296794 IFRD1O00458 451 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 MGRN1O60291 552 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CREB1P16220 341 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZNF7P17097 686 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CD52P31358 61 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CDKN2BP42772 138 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 DGKZQ13574 1117 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CPXM1Q96SM3 734 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 TBCDQ9BTW9 1192 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 NFKBIZQ9BYH8 718 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 NOCTQ9UK39 431 aaKnown RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 NCKAP1Q9Y2A7 1128 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 AP4B1Q9Y6B7 739 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 C3P01024 1663 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 YDJCA8MPS7 323 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 EFCAB14O75071 495 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 GJB1P08034 283 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 HIRAP54198 1017 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 PTP4A2Q12974 167 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 LBX2Q6XYB7 198 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 SPATA6LQ8N4H0 392 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZNF276Q8N554 614 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 DGCR6LQ9BY27 220 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZCCHC2Q9C0B9 1178 aaKnown RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 DENND2DQ9H6A0 471 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CATSPERZQ9NTU4 200 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 TPRKBQ9Y3C4 175 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 PAPSS1O43252 624 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 IGSF6O95976 241 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 IMPDH2P12268 514 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CCNB1P14635 433 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 TFEBP19484 476 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 PLCL1Q15111 1095 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 ARMCX4Q5H9R4 360 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 ADGRD1Q6QNK2 874 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 PIGWQ7Z7B1 504 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 GPSM1Q86YR5 675 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 NLGN2Q8NFZ4 835 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 RDH11Q8TC12 318 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 TRPC4APQ8TEL6 797 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 APOL4Q9BPW4 351 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 MRPL57Q9BQC6 102 aaKnown RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 ZNF112Q9UJU3 913 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 PRPF19Q9UMS4 504 aaKnown RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 SATB2Q9UPW6 733 aa16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 CAB39Q9Y376 341 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 MRPS23Q9Y3D9 190 aaKnown RBP16.21■□□□□ 0.19
ARHGEF28-201ENST00000296794 FGF10O15520 208 aaPredicted RBP16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 ERCC2P18074 760 aa16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 BLVRAP53004 296 aa16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 PPP1R26Q5T8A7 1209 aaPredicted RBP16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 HEATR4Q86WZ0 1026 aa16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 PPP1R13LQ8WUF5 828 aa16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 SUSD6Q92537 303 aa16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 CLPTM1LQ96KA5 538 aa16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 MFSD1Q9H3U5 465 aa16.21■□□□□ 0.18
ARHGEF28-201ENST00000296794 PDZK1P1A8MUH7 402 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 KPNA3O00505 521 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 PEX11AO75192 247 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 LRCH4O75427 683 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 STAU1O95793 577 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 C4BPAP04003 597 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CHRNB2P17787 502 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 GPC1P35052 558 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CLCN5P51795 746 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 HADHBP55084 474 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 ALDH6A1Q02252 535 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 USP41Q3LFD5 358 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 RNASEH2BQ5TBB1 312 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 LENG9Q96B70 501 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 POLR1EQ9GZS1 481 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 TBC1D3BA6NDS4 549 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 TRIM24O15164 1050 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 PBLDP30039 288 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CRHR1P34998 444 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 KRT20P35900 424 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 LPCAT4Q643R3 524 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 STAG3L4Q8TBR4 150 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 C6orf62Q9GZU0 229 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CAB39LQ9H9S4 337 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 ASAH2Q9NR71 780 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 SNTNA6NMZ2 147 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 ABLIM1O14639 778 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 BUD23O43709 281 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CSH1P0DML2 217 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CSH2P0DML3 217 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 HNRNPLP14866 589 aaKnown RBP eCLIP16.2■□□□□ 0.187e-7■■□□□ 13.9
ARHGEF28-201ENST00000296794 TSPAN8P19075 237 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 RPL9P32969 192 aaKnown RBP16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CD86P42081 329 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 SLC16A1P53985 500 aa16.2■□□□□ 0.18
ARHGEF28-201ENST00000296794 CTBP1Q13363 440 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms