RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 IL36AQ9UHA7 158 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
HMGB2-201ENST00000296503 METTL12A8MUP2 240 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 PLK4O00444 970 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 KHNYNO15037 678 aaKnown RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 FOXD2O60548 495 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 NDUFA10O95299 355 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 LCA5LO95447 670 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 PRNPP04156 253 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 KRT7P08729 469 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 FECHP22830 423 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TAS2R40P59535 323 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 DPYSQ14117 519 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 AASDHQ4L235 1098 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 MAP7D3Q8IWC1 876 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 AADATQ8N5Z0 425 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TMIEQ8NEW7 156 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 GRIN3AQ8TCU5 1115 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 SNX19Q92543 992 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 ISG20Q96AZ6 181 aaKnown RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 CSPG4P5Q96PW8 444 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 HEPHQ9BQS7 1158 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 CALN1Q9BXU9 219 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TM6SF2Q9BZW4 377 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 C6orf106Q9H6K1 298 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 LRRC19Q9H756 370 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 DYRK4Q9NR20 520 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 NUMA1Q14980 2115 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3DA0A087WVF3 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3IA0A087WXS9 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3EA0A087X179 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3KA0A087X1G2 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3FA6NER0 549 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 LRRC72A6NJI9 287 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 PATE3B3GLJ2 98 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3LB9A6J9 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 J3KR12 359 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 ZNF821O75541 412 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 MTA2O94776 668 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 FSBPO95073 299 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 CTSLP07711 333 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3HP0C7X1 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 MCM3P25205 808 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 MAN1A1P33908 653 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 METAP1P53582 386 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 SNRPD1P62314 119 aaKnown RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 LMNB2Q03252 620 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 INO80DQ53TQ3 878 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3GQ6DHY5 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3CQ6IPX1 549 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TCEAL6Q6IPX3 200 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 WDR93Q6P2C0 686 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TBC1D3Q8IZP1 549 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 CASKIN2Q8WXE0 1202 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 TCEAL3Q969E4 200 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 WDR24Q96S15 920 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 ETNK2Q9NVF9 386 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 UBA2Q9UBT2 640 aaPredicted RBP12.29□□□□□ -0.44
HMGB2-201ENST00000296503 FZD4Q9ULV1 537 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 JRKLQ9Y4A0 524 aa12.29□□□□□ -0.44
HMGB2-201ENST00000296503 ZNF292O60281 2723 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 FRYLO94915 3013 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 PRR5-ARHGAP8B1AHC4 643 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 LEFTY1O75610 366 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 TMCC1O94876 653 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CFIP05156 583 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CD48P09326 243 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CCDC175P0C221 793 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 GNSP15586 552 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CCNHP51946 323 aaPredicted RBP12.28□□□□□ -0.44
HMGB2-201ENST00000296503 RHOAP61586 193 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 ARHGAP8P85298 464 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CCDC15Q0P6D6 951 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CNTN1Q12860 1018 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 PDK2Q15119 407 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 WHAMMP3Q1A5X7 153 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 DUOXA1Q1HG43 343 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 ODF2Q5BJF6 829 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 TRIM61Q5EBN2 209 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 PLPP6Q8IY26 295 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CEP76Q8TAP6 659 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 NUSAP1Q9BXS6 441 aaKnown RBP12.28□□□□□ -0.44
HMGB2-201ENST00000296503 PCED1AQ9H1Q7 454 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 ZDHHC6Q9H6R6 413 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 ANKZF1Q9H8Y5 726 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 SP110Q9HB58 689 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 KLHL11Q9NVR0 708 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 EIF2B4Q9UI10 523 aaKnown RBP12.28□□□□□ -0.44
HMGB2-201ENST00000296503 TFR2Q9UP52 801 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 MFHAS1Q9Y4C4 1052 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 CHD5Q8TDI0 1954 aa12.28□□□□□ -0.44
HMGB2-201ENST00000296503 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.27□□□□□ -0.44
HMGB2-201ENST00000296503 KRIT1O00522 736 aa12.27□□□□□ -0.44
HMGB2-201ENST00000296503 GDF9O60383 454 aa12.27□□□□□ -0.44
HMGB2-201ENST00000296503 PRAMEF11O60813 436 aa12.27□□□□□ -0.44
HMGB2-201ENST00000296503 POP4O95707 220 aaKnown RBP12.27□□□□□ -0.44
HMGB2-201ENST00000296503 GSRP00390 522 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms