RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MYLK2Q9H1R3 596 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 VPS45Q9NRW7 570 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 SRRM3A6NNA2 597 aaPredicted RBP15.57■□□□□ 0.08
TIMP3-201ENST00000266085 VPS4BO75351 444 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 IFNA14P01570 189 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 TFEBP19484 476 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 PTP4A2Q12974 167 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 CTBP1Q13363 440 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 TEX44Q53QW1 395 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 PIWIL4Q7Z3Z4 852 aaKnown RBP15.57■□□□□ 0.08
TIMP3-201ENST00000266085 SLC41A1Q8IVJ1 513 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 ZNF786Q8N393 782 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 CNBD2Q96M20 576 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 NSMCE2Q96MF7 247 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 GLOD4Q9HC38 313 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 SLC24A3Q9HC58 644 aa15.57■□□□□ 0.08
TIMP3-201ENST00000266085 EXOSC4Q9NPD3 245 aaKnown RBP15.57■□□□□ 0.08
TIMP3-201ENST00000266085 AJAP1Q9UKB5 411 aaPredicted RBP15.57■□□□□ 0.08
TIMP3-201ENST00000266085 FGF1P05230 155 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 FCGR1AP12314 374 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PTPN9P43378 593 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PFKPQ01813 784 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 GRB14Q14449 540 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 TIGD5Q53EQ6 642 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 FAXDC2Q96IV6 333 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 SLC28A3Q9HAS3 691 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 CFAP97Q9P2B7 532 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 ZMYM5Q9UJ78 669 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PADI4Q9UM07 663 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 TDRKHQ9Y2W6 561 aaKnown RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 SYN3O14994 580 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 CLDN11O75508 207 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 RPN2P04844 631 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 RPL17P18621 184 aaKnown RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 LPOP22079 712 aaPredicted RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 RFX3P48380 749 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 FRG1Q14331 258 aaKnown RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 TJAP1Q5JTD0 557 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 AFTPHQ6ULP2 937 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 RNF148Q8N7C7 305 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 HDAC10Q969S8 669 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 VPS33AQ96AX1 596 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 NDNQ99608 321 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PIF1Q9H611 641 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 C6orf203Q9P0P8 240 aaPredicted RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 TMCC3Q9ULS5 477 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 NCKAP1Q9Y2A7 1128 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 MFSD11O43934 449 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 ATP6V1B2P21281 511 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 ME2P23368 584 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 CLK1P49759 484 aaKnown RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 TLE2Q04725 743 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 EIF2B5Q13144 721 aaKnown RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 WASHC2DQ5SRD0 308 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 ZNF618Q5T7W0 954 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 ARCQ7LC44 396 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 TRABD2AQ86V40 505 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 MICU2Q8IYU8 434 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 OR6K2Q8NGY2 324 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PPP1R16AQ96I34 528 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 KCTD14Q9BQ13 255 aaPredicted RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 SEMA4BQ9NPR2 832 aaPredicted RBP15.56■□□□□ 0.08
TIMP3-201ENST00000266085 HPS4Q9NQG7 708 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 SYBUQ9NX95 663 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 IL1BP01584 269 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 ANXA5P08758 320 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 CD48P09326 243 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PSMC3P17980 439 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 RAB10P61026 200 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 ZBTB17Q13105 803 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PPP1R15BQ5SWA1 713 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 GPR158Q5T848 1215 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PRMT9Q6P2P2 845 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 PLD3Q8IV08 490 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 B4GALNT2Q8NHY0 566 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 FBXL18Q96ME1 805 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 TLE6Q9H808 572 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 CYLDQ9NQC7 956 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 VPS51Q9UID3 782 aa15.56■□□□□ 0.08
TIMP3-201ENST00000266085 MAGEA13PA6NCF6 341 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 C2CD4BA6NLJ0 364 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 LRIG2O94898 1065 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 CTPS1P17812 591 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 ACSM2AQ08AH3 577 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 GALNT3Q14435 633 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 SOWAHAQ2M3V2 549 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 ACSM2BQ68CK6 577 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 MARK2Q7KZI7 788 aaKnown RBP15.55■□□□□ 0.08
TIMP3-201ENST00000266085 FAM228AQ86W67 206 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 PTGR2Q8N8N7 351 aaPredicted RBP15.55■□□□□ 0.08
TIMP3-201ENST00000266085 KCTD15Q96SI1 283 aaPredicted RBP15.55■□□□□ 0.08
TIMP3-201ENST00000266085 PHACTR1Q9C0D0 580 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 LRRC4CQ9HCJ2 640 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 FBXO10Q9UK96 956 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 SORCS3Q9UPU3 1222 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 PMM2O15305 246 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 C1RP00736 705 aa15.55■□□□□ 0.08
TIMP3-201ENST00000266085 PROCP04070 461 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms